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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism acb: Acinetobacter baumannii ATCC 17978

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
acb00010 Glycolysis / Gluconeogenesis SBML MML
acb00020 Citrate cycle (TCA cycle) SBML MML
acb00030 Pentose phosphate pathway SBML MML
acb00031 (Undocumented) SBML MML
acb00040 Pentose and glucuronate interconversions SBML MML
acb00051 Fructose and mannose metabolism SBML MML
acb00052 Galactose metabolism SBML MML
acb00053 Ascorbate and aldarate metabolism SBML MML
acb00061 Fatty acid biosynthesis SBML MML
acb00062 Fatty acid elongation in mitochondria SBML MML
acb00071 Fatty acid metabolism SBML MML
acb00072 Synthesis and degradation of ketone bodies SBML MML
acb00100 (Undocumented) SBML MML
acb00120 (Undocumented) SBML MML
acb00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
acb00150 Androgen and estrogen metabolism SBML MML
acb00220 (Undocumented) SBML MML
acb00230 Purine metabolism SBML MML
acb00240 Pyrimidine metabolism SBML MML
acb00251 (Undocumented) SBML MML
acb00252 (Undocumented) SBML MML
acb00260 Glycine, serine and threonine metabolism SBML MML
acb00271 (Undocumented) SBML MML
acb00272 (Undocumented) SBML MML
acb00280 Valine, leucine and isoleucine degradation SBML MML
acb00281 Geraniol degradation SBML MML
acb00290 Valine, leucine and isoleucine biosynthesis SBML MML
acb00300 Lysine biosynthesis SBML MML
acb00310 Lysine degradation SBML MML
acb00311 Penicillin and cephalosporin biosynthesis SBML MML
acb00330 Arginine and proline metabolism SBML MML
acb00340 Histidine metabolism SBML MML
acb00350 Tyrosine metabolism SBML MML
acb00360 Phenylalanine metabolism SBML MML
acb00361 gamma-Hexachlorocyclohexane degradation SBML MML
acb00362 (Undocumented) SBML MML
acb00364 Fluorobenzoate degradation SBML MML
acb00380 Tryptophan metabolism SBML MML
acb00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
acb00401 Novobiocin biosynthesis SBML MML
acb00410 beta-Alanine metabolism SBML MML
acb00430 Taurine and hypotaurine metabolism SBML MML
acb00440 Phosphonate and phosphinate metabolism SBML MML
acb00450 Selenoamino acid metabolism SBML MML
acb00460 (Undocumented) SBML MML
acb00471 D-Glutamine and D-glutamate metabolism SBML MML
acb00473 D-Alanine metabolism SBML MML
acb00480 Glutathione metabolism SBML MML
acb00500 Starch and sucrose metabolism SBML MML
acb00520 Amino sugar and nucleotide sugar metabolism SBML MML
acb00521 Streptomycin biosynthesis SBML MML
acb00530 (Undocumented) SBML MML
acb00540 Lipopolysaccharide biosynthesis SBML MML
acb00550 Peptidoglycan biosynthesis SBML MML
acb00561 Glycerolipid metabolism SBML MML
acb00562 Inositol phosphate metabolism SBML MML
acb00564 Glycerophospholipid metabolism SBML MML
acb00590 Arachidonic acid metabolism SBML MML
acb00591 Linoleic acid metabolism SBML MML
acb00592 alpha-Linolenic acid metabolism SBML MML
acb00620 Pyruvate metabolism SBML MML
acb00622 Toluene and xylene degradation SBML MML
acb00623 2,4-Dichlorobenzoate degradation SBML MML
acb00624 1- and 2-Methylnaphthalene degradation SBML MML
acb00627 1,4-Dichlorobenzene degradation SBML MML
acb00630 Glyoxylate and dicarboxylate metabolism SBML MML
acb00632 (Undocumented) SBML MML
acb00633 Trinitrotoluene degradation SBML MML
acb00640 Propanoate metabolism SBML MML
acb00641 3-Chloroacrylic acid degradation SBML MML
acb00642 Ethylbenzene degradation SBML MML
acb00643 Styrene degradation SBML MML
acb00650 Butanoate metabolism SBML MML
acb00660 C5-Branched dibasic acid metabolism SBML MML
acb00670 One carbon pool by folate SBML MML
acb00680 Methane metabolism SBML MML
acb00710 (Undocumented) SBML MML
acb00720 (Undocumented) SBML MML
acb00730 Thiamine metabolism SBML MML
acb00740 Riboflavin metabolism SBML MML
acb00750 Vitamin B6 metabolism SBML MML
acb00760 Nicotinate and nicotinamide metabolism SBML MML
acb00770 Pantothenate and CoA biosynthesis SBML MML
acb00780 Biotin metabolism SBML MML
acb00785 Lipoic acid metabolism SBML MML
acb00790 Folate biosynthesis SBML MML
acb00791 Atrazine degradation SBML MML
acb00860 Porphyrin and chlorophyll metabolism SBML MML
acb00900 Terpenoid backbone biosynthesis SBML MML
acb00903 (Undocumented) SBML MML
acb00910 Nitrogen metabolism SBML MML
acb00920 Sulfur metabolism SBML MML
acb00930 Caprolactam degradation SBML MML
acb00940 (Undocumented) SBML MML
acb00941 (Undocumented) SBML MML
acb00950 (Undocumented) SBML MML
acb00960 (Undocumented) SBML MML
acb00970 Aminoacyl-tRNA biosynthesis SBML MML
acb00980 Metabolism of xenobiotics by cytochrome P450 SBML MML
acb00982 (Undocumented) SBML MML
acb00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.