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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism bcz: Bacillus cereus ZK

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
bcz00010 Glycolysis / Gluconeogenesis SBML MML
bcz00020 Citrate cycle (TCA cycle) SBML MML
bcz00030 Pentose phosphate pathway SBML MML
bcz00031 (Undocumented) SBML MML
bcz00040 Pentose and glucuronate interconversions SBML MML
bcz00051 Fructose and mannose metabolism SBML MML
bcz00052 Galactose metabolism SBML MML
bcz00053 Ascorbate and aldarate metabolism SBML MML
bcz00061 Fatty acid biosynthesis SBML MML
bcz00062 Fatty acid elongation in mitochondria SBML MML
bcz00071 Fatty acid metabolism SBML MML
bcz00072 Synthesis and degradation of ketone bodies SBML MML
bcz00100 (Undocumented) SBML MML
bcz00120 (Undocumented) SBML MML
bcz00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
bcz00150 Androgen and estrogen metabolism SBML MML
bcz00220 (Undocumented) SBML MML
bcz00230 Purine metabolism SBML MML
bcz00240 Pyrimidine metabolism SBML MML
bcz00251 (Undocumented) SBML MML
bcz00252 (Undocumented) SBML MML
bcz00260 Glycine, serine and threonine metabolism SBML MML
bcz00271 (Undocumented) SBML MML
bcz00272 (Undocumented) SBML MML
bcz00280 Valine, leucine and isoleucine degradation SBML MML
bcz00281 Geraniol degradation SBML MML
bcz00290 Valine, leucine and isoleucine biosynthesis SBML MML
bcz00300 Lysine biosynthesis SBML MML
bcz00310 Lysine degradation SBML MML
bcz00311 Penicillin and cephalosporin biosynthesis SBML MML
bcz00330 Arginine and proline metabolism SBML MML
bcz00340 Histidine metabolism SBML MML
bcz00350 Tyrosine metabolism SBML MML
bcz00351 1,1,1-Trichloro-2,2-bis(4-chlorophenyl)ethane (DDT) degradation SBML MML
bcz00360 Phenylalanine metabolism SBML MML
bcz00361 gamma-Hexachlorocyclohexane degradation SBML MML
bcz00362 (Undocumented) SBML MML
bcz00363 Bisphenol A degradation SBML MML
bcz00380 Tryptophan metabolism SBML MML
bcz00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
bcz00401 Novobiocin biosynthesis SBML MML
bcz00410 beta-Alanine metabolism SBML MML
bcz00430 Taurine and hypotaurine metabolism SBML MML
bcz00440 Phosphonate and phosphinate metabolism SBML MML
bcz00450 Selenoamino acid metabolism SBML MML
bcz00460 (Undocumented) SBML MML
bcz00471 D-Glutamine and D-glutamate metabolism SBML MML
bcz00472 D-Arginine and D-ornithine metabolism SBML MML
bcz00473 D-Alanine metabolism SBML MML
bcz00480 Glutathione metabolism SBML MML
bcz00500 Starch and sucrose metabolism SBML MML
bcz00510 (Undocumented) SBML MML
bcz00520 Amino sugar and nucleotide sugar metabolism SBML MML
bcz00521 Streptomycin biosynthesis SBML MML
bcz00523 Polyketide sugar unit biosynthesis SBML MML
bcz00530 (Undocumented) SBML MML
bcz00550 Peptidoglycan biosynthesis SBML MML
bcz00561 Glycerolipid metabolism SBML MML
bcz00562 Inositol phosphate metabolism SBML MML
bcz00564 Glycerophospholipid metabolism SBML MML
bcz00565 Ether lipid metabolism SBML MML
bcz00590 Arachidonic acid metabolism SBML MML
bcz00600 Sphingolipid metabolism SBML MML
bcz00620 Pyruvate metabolism SBML MML
bcz00622 Toluene and xylene degradation SBML MML
bcz00623 2,4-Dichlorobenzoate degradation SBML MML
bcz00624 1- and 2-Methylnaphthalene degradation SBML MML
bcz00626 Naphthalene and anthracene degradation SBML MML
bcz00627 1,4-Dichlorobenzene degradation SBML MML
bcz00630 Glyoxylate and dicarboxylate metabolism SBML MML
bcz00631 1,2-Dichloroethane degradation SBML MML
bcz00632 (Undocumented) SBML MML
bcz00640 Propanoate metabolism SBML MML
bcz00641 3-Chloroacrylic acid degradation SBML MML
bcz00643 Styrene degradation SBML MML
bcz00650 Butanoate metabolism SBML MML
bcz00660 C5-Branched dibasic acid metabolism SBML MML
bcz00670 One carbon pool by folate SBML MML
bcz00680 Methane metabolism SBML MML
bcz00710 (Undocumented) SBML MML
bcz00720 (Undocumented) SBML MML
bcz00730 Thiamine metabolism SBML MML
bcz00740 Riboflavin metabolism SBML MML
bcz00750 Vitamin B6 metabolism SBML MML
bcz00760 Nicotinate and nicotinamide metabolism SBML MML
bcz00770 Pantothenate and CoA biosynthesis SBML MML
bcz00780 Biotin metabolism SBML MML
bcz00785 Lipoic acid metabolism SBML MML
bcz00790 Folate biosynthesis SBML MML
bcz00860 Porphyrin and chlorophyll metabolism SBML MML
bcz00900 Terpenoid backbone biosynthesis SBML MML
bcz00903 (Undocumented) SBML MML
bcz00910 Nitrogen metabolism SBML MML
bcz00920 Sulfur metabolism SBML MML
bcz00930 Caprolactam degradation SBML MML
bcz00940 (Undocumented) SBML MML
bcz00960 (Undocumented) SBML MML
bcz00970 Aminoacyl-tRNA biosynthesis SBML MML
bcz00980 Metabolism of xenobiotics by cytochrome P450 SBML MML
bcz00982 (Undocumented) SBML MML
bcz00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.