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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism blj: Bifidobacterium longum DJO10A

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
blj00010 Glycolysis / Gluconeogenesis SBML MML
blj00020 Citrate cycle (TCA cycle) SBML MML
blj00030 Pentose phosphate pathway SBML MML
blj00040 Pentose and glucuronate interconversions SBML MML
blj00051 Fructose and mannose metabolism SBML MML
blj00052 Galactose metabolism SBML MML
blj00053 Ascorbate and aldarate metabolism SBML MML
blj00061 Fatty acid biosynthesis SBML MML
blj00071 Fatty acid metabolism SBML MML
blj00100 (Undocumented) SBML MML
blj00120 (Undocumented) SBML MML
blj00220 (Undocumented) SBML MML
blj00230 Purine metabolism SBML MML
blj00240 Pyrimidine metabolism SBML MML
blj00251 (Undocumented) SBML MML
blj00252 (Undocumented) SBML MML
blj00260 Glycine, serine and threonine metabolism SBML MML
blj00271 (Undocumented) SBML MML
blj00272 (Undocumented) SBML MML
blj00280 Valine, leucine and isoleucine degradation SBML MML
blj00290 Valine, leucine and isoleucine biosynthesis SBML MML
blj00300 Lysine biosynthesis SBML MML
blj00310 Lysine degradation SBML MML
blj00330 Arginine and proline metabolism SBML MML
blj00340 Histidine metabolism SBML MML
blj00350 Tyrosine metabolism SBML MML
blj00360 Phenylalanine metabolism SBML MML
blj00361 gamma-Hexachlorocyclohexane degradation SBML MML
blj00380 Tryptophan metabolism SBML MML
blj00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
blj00401 Novobiocin biosynthesis SBML MML
blj00410 beta-Alanine metabolism SBML MML
blj00450 Selenoamino acid metabolism SBML MML
blj00460 (Undocumented) SBML MML
blj00480 Glutathione metabolism SBML MML
blj00500 Starch and sucrose metabolism SBML MML
blj00520 Amino sugar and nucleotide sugar metabolism SBML MML
blj00521 Streptomycin biosynthesis SBML MML
blj00523 Polyketide sugar unit biosynthesis SBML MML
blj00530 (Undocumented) SBML MML
blj00550 Peptidoglycan biosynthesis SBML MML
blj00561 Glycerolipid metabolism SBML MML
blj00564 Glycerophospholipid metabolism SBML MML
blj00565 Ether lipid metabolism SBML MML
blj00600 Sphingolipid metabolism SBML MML
blj00620 Pyruvate metabolism SBML MML
blj00624 1- and 2-Methylnaphthalene degradation SBML MML
blj00630 Glyoxylate and dicarboxylate metabolism SBML MML
blj00632 (Undocumented) SBML MML
blj00640 Propanoate metabolism SBML MML
blj00641 3-Chloroacrylic acid degradation SBML MML
blj00650 Butanoate metabolism SBML MML
blj00660 C5-Branched dibasic acid metabolism SBML MML
blj00670 One carbon pool by folate SBML MML
blj00680 Methane metabolism SBML MML
blj00710 (Undocumented) SBML MML
blj00720 (Undocumented) SBML MML
blj00730 Thiamine metabolism SBML MML
blj00740 Riboflavin metabolism SBML MML
blj00750 Vitamin B6 metabolism SBML MML
blj00760 Nicotinate and nicotinamide metabolism SBML MML
blj00770 Pantothenate and CoA biosynthesis SBML MML
blj00780 Biotin metabolism SBML MML
blj00790 Folate biosynthesis SBML MML
blj00860 Porphyrin and chlorophyll metabolism SBML MML
blj00900 Terpenoid backbone biosynthesis SBML MML
blj00903 (Undocumented) SBML MML
blj00910 Nitrogen metabolism SBML MML
blj00930 Caprolactam degradation SBML MML
blj00950 (Undocumented) SBML MML
blj00960 (Undocumented) SBML MML
blj00970 Aminoacyl-tRNA biosynthesis SBML MML
blj00980 Metabolism of xenobiotics by cytochrome P450 SBML MML
blj00982 (Undocumented) SBML MML
blj00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.