This page will look better in a graphical browser that supports web standards, but is accessible to any browser or internet device.

Served by Samwise.

Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism bmn: Burkholderia mallei NCTC 10247

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
bmn00010 Glycolysis / Gluconeogenesis SBML MML
bmn00020 Citrate cycle (TCA cycle) SBML MML
bmn00030 Pentose phosphate pathway SBML MML
bmn00031 (Undocumented) SBML MML
bmn00040 Pentose and glucuronate interconversions SBML MML
bmn00051 Fructose and mannose metabolism SBML MML
bmn00052 Galactose metabolism SBML MML
bmn00053 Ascorbate and aldarate metabolism SBML MML
bmn00061 Fatty acid biosynthesis SBML MML
bmn00062 Fatty acid elongation in mitochondria SBML MML
bmn00071 Fatty acid metabolism SBML MML
bmn00072 Synthesis and degradation of ketone bodies SBML MML
bmn00100 (Undocumented) SBML MML
bmn00120 (Undocumented) SBML MML
bmn00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
bmn00150 Androgen and estrogen metabolism SBML MML
bmn00220 (Undocumented) SBML MML
bmn00230 Purine metabolism SBML MML
bmn00240 Pyrimidine metabolism SBML MML
bmn00251 (Undocumented) SBML MML
bmn00252 (Undocumented) SBML MML
bmn00260 Glycine, serine and threonine metabolism SBML MML
bmn00271 (Undocumented) SBML MML
bmn00272 (Undocumented) SBML MML
bmn00280 Valine, leucine and isoleucine degradation SBML MML
bmn00281 Geraniol degradation SBML MML
bmn00290 Valine, leucine and isoleucine biosynthesis SBML MML
bmn00300 Lysine biosynthesis SBML MML
bmn00310 Lysine degradation SBML MML
bmn00311 Penicillin and cephalosporin biosynthesis SBML MML
bmn00330 Arginine and proline metabolism SBML MML
bmn00340 Histidine metabolism SBML MML
bmn00350 Tyrosine metabolism SBML MML
bmn00360 Phenylalanine metabolism SBML MML
bmn00361 gamma-Hexachlorocyclohexane degradation SBML MML
bmn00362 (Undocumented) SBML MML
bmn00363 Bisphenol A degradation SBML MML
bmn00364 Fluorobenzoate degradation SBML MML
bmn00380 Tryptophan metabolism SBML MML
bmn00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
bmn00401 Novobiocin biosynthesis SBML MML
bmn00410 beta-Alanine metabolism SBML MML
bmn00430 Taurine and hypotaurine metabolism SBML MML
bmn00440 Phosphonate and phosphinate metabolism SBML MML
bmn00450 Selenoamino acid metabolism SBML MML
bmn00460 (Undocumented) SBML MML
bmn00471 D-Glutamine and D-glutamate metabolism SBML MML
bmn00472 D-Arginine and D-ornithine metabolism SBML MML
bmn00473 D-Alanine metabolism SBML MML
bmn00480 Glutathione metabolism SBML MML
bmn00500 Starch and sucrose metabolism SBML MML
bmn00520 Amino sugar and nucleotide sugar metabolism SBML MML
bmn00521 Streptomycin biosynthesis SBML MML
bmn00523 Polyketide sugar unit biosynthesis SBML MML
bmn00530 (Undocumented) SBML MML
bmn00540 Lipopolysaccharide biosynthesis SBML MML
bmn00550 Peptidoglycan biosynthesis SBML MML
bmn00561 Glycerolipid metabolism SBML MML
bmn00562 Inositol phosphate metabolism SBML MML
bmn00564 Glycerophospholipid metabolism SBML MML
bmn00565 Ether lipid metabolism SBML MML
bmn00590 Arachidonic acid metabolism SBML MML
bmn00592 alpha-Linolenic acid metabolism SBML MML
bmn00620 Pyruvate metabolism SBML MML
bmn00622 Toluene and xylene degradation SBML MML
bmn00623 2,4-Dichlorobenzoate degradation SBML MML
bmn00624 1- and 2-Methylnaphthalene degradation SBML MML
bmn00626 Naphthalene and anthracene degradation SBML MML
bmn00627 1,4-Dichlorobenzene degradation SBML MML
bmn00628 Fluorene degradation SBML MML
bmn00630 Glyoxylate and dicarboxylate metabolism SBML MML
bmn00631 1,2-Dichloroethane degradation SBML MML
bmn00632 (Undocumented) SBML MML
bmn00640 Propanoate metabolism SBML MML
bmn00641 3-Chloroacrylic acid degradation SBML MML
bmn00642 Ethylbenzene degradation SBML MML
bmn00643 Styrene degradation SBML MML
bmn00650 Butanoate metabolism SBML MML
bmn00660 C5-Branched dibasic acid metabolism SBML MML
bmn00670 One carbon pool by folate SBML MML
bmn00680 Methane metabolism SBML MML
bmn00710 (Undocumented) SBML MML
bmn00720 (Undocumented) SBML MML
bmn00730 Thiamine metabolism SBML MML
bmn00740 Riboflavin metabolism SBML MML
bmn00750 Vitamin B6 metabolism SBML MML
bmn00760 Nicotinate and nicotinamide metabolism SBML MML
bmn00770 Pantothenate and CoA biosynthesis SBML MML
bmn00780 Biotin metabolism SBML MML
bmn00785 Lipoic acid metabolism SBML MML
bmn00790 Folate biosynthesis SBML MML
bmn00791 Atrazine degradation SBML MML
bmn00860 Porphyrin and chlorophyll metabolism SBML MML
bmn00900 Terpenoid backbone biosynthesis SBML MML
bmn00903 (Undocumented) SBML MML
bmn00910 Nitrogen metabolism SBML MML
bmn00920 Sulfur metabolism SBML MML
bmn00930 Caprolactam degradation SBML MML
bmn00940 (Undocumented) SBML MML
bmn00941 (Undocumented) SBML MML
bmn00950 (Undocumented) SBML MML
bmn00960 (Undocumented) SBML MML
bmn00970 Aminoacyl-tRNA biosynthesis SBML MML
bmn00980 Metabolism of xenobiotics by cytochrome P450 SBML MML
bmn00982 (Undocumented) SBML MML
bmn00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.