This page will look better in a graphical browser that supports web standards, but is accessible to any browser or internet device.

Served by Samwise.

Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism bmv: Burkholderia mallei SAVP1

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
bmv00010 Glycolysis / Gluconeogenesis SBML MML
bmv00020 Citrate cycle (TCA cycle) SBML MML
bmv00030 Pentose phosphate pathway SBML MML
bmv00031 (Undocumented) SBML MML
bmv00040 Pentose and glucuronate interconversions SBML MML
bmv00051 Fructose and mannose metabolism SBML MML
bmv00052 Galactose metabolism SBML MML
bmv00053 Ascorbate and aldarate metabolism SBML MML
bmv00061 Fatty acid biosynthesis SBML MML
bmv00062 Fatty acid elongation in mitochondria SBML MML
bmv00071 Fatty acid metabolism SBML MML
bmv00072 Synthesis and degradation of ketone bodies SBML MML
bmv00100 (Undocumented) SBML MML
bmv00120 (Undocumented) SBML MML
bmv00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
bmv00150 Androgen and estrogen metabolism SBML MML
bmv00220 (Undocumented) SBML MML
bmv00230 Purine metabolism SBML MML
bmv00240 Pyrimidine metabolism SBML MML
bmv00251 (Undocumented) SBML MML
bmv00252 (Undocumented) SBML MML
bmv00260 Glycine, serine and threonine metabolism SBML MML
bmv00271 (Undocumented) SBML MML
bmv00272 (Undocumented) SBML MML
bmv00280 Valine, leucine and isoleucine degradation SBML MML
bmv00281 Geraniol degradation SBML MML
bmv00290 Valine, leucine and isoleucine biosynthesis SBML MML
bmv00300 Lysine biosynthesis SBML MML
bmv00310 Lysine degradation SBML MML
bmv00311 Penicillin and cephalosporin biosynthesis SBML MML
bmv00330 Arginine and proline metabolism SBML MML
bmv00340 Histidine metabolism SBML MML
bmv00350 Tyrosine metabolism SBML MML
bmv00360 Phenylalanine metabolism SBML MML
bmv00361 gamma-Hexachlorocyclohexane degradation SBML MML
bmv00362 (Undocumented) SBML MML
bmv00363 Bisphenol A degradation SBML MML
bmv00364 Fluorobenzoate degradation SBML MML
bmv00380 Tryptophan metabolism SBML MML
bmv00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
bmv00401 Novobiocin biosynthesis SBML MML
bmv00410 beta-Alanine metabolism SBML MML
bmv00430 Taurine and hypotaurine metabolism SBML MML
bmv00440 Phosphonate and phosphinate metabolism SBML MML
bmv00450 Selenoamino acid metabolism SBML MML
bmv00460 (Undocumented) SBML MML
bmv00471 D-Glutamine and D-glutamate metabolism SBML MML
bmv00472 D-Arginine and D-ornithine metabolism SBML MML
bmv00473 D-Alanine metabolism SBML MML
bmv00480 Glutathione metabolism SBML MML
bmv00500 Starch and sucrose metabolism SBML MML
bmv00520 Amino sugar and nucleotide sugar metabolism SBML MML
bmv00521 Streptomycin biosynthesis SBML MML
bmv00523 Polyketide sugar unit biosynthesis SBML MML
bmv00530 (Undocumented) SBML MML
bmv00540 Lipopolysaccharide biosynthesis SBML MML
bmv00550 Peptidoglycan biosynthesis SBML MML
bmv00561 Glycerolipid metabolism SBML MML
bmv00562 Inositol phosphate metabolism SBML MML
bmv00564 Glycerophospholipid metabolism SBML MML
bmv00565 Ether lipid metabolism SBML MML
bmv00590 Arachidonic acid metabolism SBML MML
bmv00592 alpha-Linolenic acid metabolism SBML MML
bmv00620 Pyruvate metabolism SBML MML
bmv00622 Toluene and xylene degradation SBML MML
bmv00623 2,4-Dichlorobenzoate degradation SBML MML
bmv00624 1- and 2-Methylnaphthalene degradation SBML MML
bmv00626 Naphthalene and anthracene degradation SBML MML
bmv00627 1,4-Dichlorobenzene degradation SBML MML
bmv00628 Fluorene degradation SBML MML
bmv00630 Glyoxylate and dicarboxylate metabolism SBML MML
bmv00631 1,2-Dichloroethane degradation SBML MML
bmv00632 (Undocumented) SBML MML
bmv00640 Propanoate metabolism SBML MML
bmv00641 3-Chloroacrylic acid degradation SBML MML
bmv00642 Ethylbenzene degradation SBML MML
bmv00643 Styrene degradation SBML MML
bmv00650 Butanoate metabolism SBML MML
bmv00660 C5-Branched dibasic acid metabolism SBML MML
bmv00670 One carbon pool by folate SBML MML
bmv00680 Methane metabolism SBML MML
bmv00710 (Undocumented) SBML MML
bmv00720 (Undocumented) SBML MML
bmv00730 Thiamine metabolism SBML MML
bmv00740 Riboflavin metabolism SBML MML
bmv00750 Vitamin B6 metabolism SBML MML
bmv00760 Nicotinate and nicotinamide metabolism SBML MML
bmv00770 Pantothenate and CoA biosynthesis SBML MML
bmv00780 Biotin metabolism SBML MML
bmv00785 Lipoic acid metabolism SBML MML
bmv00790 Folate biosynthesis SBML MML
bmv00791 Atrazine degradation SBML MML
bmv00860 Porphyrin and chlorophyll metabolism SBML MML
bmv00900 Terpenoid backbone biosynthesis SBML MML
bmv00903 (Undocumented) SBML MML
bmv00910 Nitrogen metabolism SBML MML
bmv00920 Sulfur metabolism SBML MML
bmv00930 Caprolactam degradation SBML MML
bmv00940 (Undocumented) SBML MML
bmv00941 (Undocumented) SBML MML
bmv00950 (Undocumented) SBML MML
bmv00960 (Undocumented) SBML MML
bmv00970 Aminoacyl-tRNA biosynthesis SBML MML
bmv00980 Metabolism of xenobiotics by cytochrome P450 SBML MML
bmv00982 (Undocumented) SBML MML
bmv00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.