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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism bmy: Brugia malayi (filaria)

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
bmy00010 Glycolysis / Gluconeogenesis SBML MML
bmy00020 Citrate cycle (TCA cycle) SBML MML
bmy00030 Pentose phosphate pathway SBML MML
bmy00040 Pentose and glucuronate interconversions SBML MML
bmy00051 Fructose and mannose metabolism SBML MML
bmy00052 Galactose metabolism SBML MML
bmy00053 Ascorbate and aldarate metabolism SBML MML
bmy00061 Fatty acid biosynthesis SBML MML
bmy00062 Fatty acid elongation in mitochondria SBML MML
bmy00071 Fatty acid metabolism SBML MML
bmy00100 (Undocumented) SBML MML
bmy00120 (Undocumented) SBML MML
bmy00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
bmy00150 Androgen and estrogen metabolism SBML MML
bmy00220 (Undocumented) SBML MML
bmy00230 Purine metabolism SBML MML
bmy00240 Pyrimidine metabolism SBML MML
bmy00251 (Undocumented) SBML MML
bmy00252 (Undocumented) SBML MML
bmy00260 Glycine, serine and threonine metabolism SBML MML
bmy00271 (Undocumented) SBML MML
bmy00272 (Undocumented) SBML MML
bmy00280 Valine, leucine and isoleucine degradation SBML MML
bmy00281 Geraniol degradation SBML MML
bmy00290 Valine, leucine and isoleucine biosynthesis SBML MML
bmy00300 Lysine biosynthesis SBML MML
bmy00310 Lysine degradation SBML MML
bmy00330 Arginine and proline metabolism SBML MML
bmy00340 Histidine metabolism SBML MML
bmy00350 Tyrosine metabolism SBML MML
bmy00360 Phenylalanine metabolism SBML MML
bmy00361 gamma-Hexachlorocyclohexane degradation SBML MML
bmy00363 Bisphenol A degradation SBML MML
bmy00380 Tryptophan metabolism SBML MML
bmy00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
bmy00401 Novobiocin biosynthesis SBML MML
bmy00410 beta-Alanine metabolism SBML MML
bmy00430 Taurine and hypotaurine metabolism SBML MML
bmy00440 Phosphonate and phosphinate metabolism SBML MML
bmy00450 Selenoamino acid metabolism SBML MML
bmy00460 (Undocumented) SBML MML
bmy00471 D-Glutamine and D-glutamate metabolism SBML MML
bmy00480 Glutathione metabolism SBML MML
bmy00500 Starch and sucrose metabolism SBML MML
bmy00510 (Undocumented) SBML MML
bmy00520 Amino sugar and nucleotide sugar metabolism SBML MML
bmy00521 Streptomycin biosynthesis SBML MML
bmy00530 (Undocumented) SBML MML
bmy00550 Peptidoglycan biosynthesis SBML MML
bmy00561 Glycerolipid metabolism SBML MML
bmy00562 Inositol phosphate metabolism SBML MML
bmy00564 Glycerophospholipid metabolism SBML MML
bmy00565 Ether lipid metabolism SBML MML
bmy00590 Arachidonic acid metabolism SBML MML
bmy00591 Linoleic acid metabolism SBML MML
bmy00592 alpha-Linolenic acid metabolism SBML MML
bmy00600 Sphingolipid metabolism SBML MML
bmy00620 Pyruvate metabolism SBML MML
bmy00624 1- and 2-Methylnaphthalene degradation SBML MML
bmy00626 Naphthalene and anthracene degradation SBML MML
bmy00630 Glyoxylate and dicarboxylate metabolism SBML MML
bmy00632 (Undocumented) SBML MML
bmy00640 Propanoate metabolism SBML MML
bmy00641 3-Chloroacrylic acid degradation SBML MML
bmy00650 Butanoate metabolism SBML MML
bmy00660 C5-Branched dibasic acid metabolism SBML MML
bmy00670 One carbon pool by folate SBML MML
bmy00680 Methane metabolism SBML MML
bmy00710 (Undocumented) SBML MML
bmy00720 (Undocumented) SBML MML
bmy00730 Thiamine metabolism SBML MML
bmy00740 Riboflavin metabolism SBML MML
bmy00750 Vitamin B6 metabolism SBML MML
bmy00760 Nicotinate and nicotinamide metabolism SBML MML
bmy00770 Pantothenate and CoA biosynthesis SBML MML
bmy00780 Biotin metabolism SBML MML
bmy00790 Folate biosynthesis SBML MML
bmy00830 Retinol metabolism SBML MML
bmy00860 Porphyrin and chlorophyll metabolism SBML MML
bmy00900 Terpenoid backbone biosynthesis SBML MML
bmy00903 (Undocumented) SBML MML
bmy00910 Nitrogen metabolism SBML MML
bmy00920 Sulfur metabolism SBML MML
bmy00930 Caprolactam degradation SBML MML
bmy00940 (Undocumented) SBML MML
bmy00950 (Undocumented) SBML MML
bmy00960 (Undocumented) SBML MML
bmy00970 Aminoacyl-tRNA biosynthesis SBML MML
bmy00980 Metabolism of xenobiotics by cytochrome P450 SBML MML
bmy00982 (Undocumented) SBML MML
bmy00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.