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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism bov: Brucella ovis

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
bov00010 Glycolysis / Gluconeogenesis SBML MML
bov00020 Citrate cycle (TCA cycle) SBML MML
bov00030 Pentose phosphate pathway SBML MML
bov00031 (Undocumented) SBML MML
bov00040 Pentose and glucuronate interconversions SBML MML
bov00051 Fructose and mannose metabolism SBML MML
bov00052 Galactose metabolism SBML MML
bov00053 Ascorbate and aldarate metabolism SBML MML
bov00061 Fatty acid biosynthesis SBML MML
bov00062 Fatty acid elongation in mitochondria SBML MML
bov00071 Fatty acid metabolism SBML MML
bov00072 Synthesis and degradation of ketone bodies SBML MML
bov00100 (Undocumented) SBML MML
bov00120 (Undocumented) SBML MML
bov00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
bov00220 (Undocumented) SBML MML
bov00230 Purine metabolism SBML MML
bov00240 Pyrimidine metabolism SBML MML
bov00251 (Undocumented) SBML MML
bov00252 (Undocumented) SBML MML
bov00260 Glycine, serine and threonine metabolism SBML MML
bov00271 (Undocumented) SBML MML
bov00272 (Undocumented) SBML MML
bov00280 Valine, leucine and isoleucine degradation SBML MML
bov00281 Geraniol degradation SBML MML
bov00290 Valine, leucine and isoleucine biosynthesis SBML MML
bov00300 Lysine biosynthesis SBML MML
bov00310 Lysine degradation SBML MML
bov00330 Arginine and proline metabolism SBML MML
bov00340 Histidine metabolism SBML MML
bov00350 Tyrosine metabolism SBML MML
bov00360 Phenylalanine metabolism SBML MML
bov00361 gamma-Hexachlorocyclohexane degradation SBML MML
bov00362 (Undocumented) SBML MML
bov00380 Tryptophan metabolism SBML MML
bov00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
bov00401 Novobiocin biosynthesis SBML MML
bov00410 beta-Alanine metabolism SBML MML
bov00430 Taurine and hypotaurine metabolism SBML MML
bov00440 Phosphonate and phosphinate metabolism SBML MML
bov00450 Selenoamino acid metabolism SBML MML
bov00460 (Undocumented) SBML MML
bov00471 D-Glutamine and D-glutamate metabolism SBML MML
bov00472 D-Arginine and D-ornithine metabolism SBML MML
bov00473 D-Alanine metabolism SBML MML
bov00480 Glutathione metabolism SBML MML
bov00500 Starch and sucrose metabolism SBML MML
bov00520 Amino sugar and nucleotide sugar metabolism SBML MML
bov00521 Streptomycin biosynthesis SBML MML
bov00523 Polyketide sugar unit biosynthesis SBML MML
bov00530 (Undocumented) SBML MML
bov00540 Lipopolysaccharide biosynthesis SBML MML
bov00550 Peptidoglycan biosynthesis SBML MML
bov00561 Glycerolipid metabolism SBML MML
bov00562 Inositol phosphate metabolism SBML MML
bov00564 Glycerophospholipid metabolism SBML MML
bov00592 alpha-Linolenic acid metabolism SBML MML
bov00620 Pyruvate metabolism SBML MML
bov00622 Toluene and xylene degradation SBML MML
bov00623 2,4-Dichlorobenzoate degradation SBML MML
bov00624 1- and 2-Methylnaphthalene degradation SBML MML
bov00626 Naphthalene and anthracene degradation SBML MML
bov00628 Fluorene degradation SBML MML
bov00630 Glyoxylate and dicarboxylate metabolism SBML MML
bov00631 1,2-Dichloroethane degradation SBML MML
bov00632 (Undocumented) SBML MML
bov00640 Propanoate metabolism SBML MML
bov00641 3-Chloroacrylic acid degradation SBML MML
bov00650 Butanoate metabolism SBML MML
bov00660 C5-Branched dibasic acid metabolism SBML MML
bov00670 One carbon pool by folate SBML MML
bov00680 Methane metabolism SBML MML
bov00710 (Undocumented) SBML MML
bov00720 (Undocumented) SBML MML
bov00730 Thiamine metabolism SBML MML
bov00740 Riboflavin metabolism SBML MML
bov00750 Vitamin B6 metabolism SBML MML
bov00760 Nicotinate and nicotinamide metabolism SBML MML
bov00770 Pantothenate and CoA biosynthesis SBML MML
bov00780 Biotin metabolism SBML MML
bov00785 Lipoic acid metabolism SBML MML
bov00790 Folate biosynthesis SBML MML
bov00791 Atrazine degradation SBML MML
bov00860 Porphyrin and chlorophyll metabolism SBML MML
bov00900 Terpenoid backbone biosynthesis SBML MML
bov00903 (Undocumented) SBML MML
bov00910 Nitrogen metabolism SBML MML
bov00920 Sulfur metabolism SBML MML
bov00930 Caprolactam degradation SBML MML
bov00940 (Undocumented) SBML MML
bov00950 (Undocumented) SBML MML
bov00970 Aminoacyl-tRNA biosynthesis SBML MML
bov00980 Metabolism of xenobiotics by cytochrome P450 SBML MML
bov00982 (Undocumented) SBML MML
bov00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.