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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism bta: Bos taurus (cow)

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
bta00010 Glycolysis / Gluconeogenesis SBML MML
bta00020 Citrate cycle (TCA cycle) SBML MML
bta00030 Pentose phosphate pathway SBML MML
bta00031 (Undocumented) SBML MML
bta00040 Pentose and glucuronate interconversions SBML MML
bta00051 Fructose and mannose metabolism SBML MML
bta00052 Galactose metabolism SBML MML
bta00053 Ascorbate and aldarate metabolism SBML MML
bta00061 Fatty acid biosynthesis SBML MML
bta00062 Fatty acid elongation in mitochondria SBML MML
bta00071 Fatty acid metabolism SBML MML
bta00072 Synthesis and degradation of ketone bodies SBML MML
bta00100 (Undocumented) SBML MML
bta00120 (Undocumented) SBML MML
bta00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
bta00140 (Undocumented) SBML MML
bta00150 Androgen and estrogen metabolism SBML MML
bta00220 (Undocumented) SBML MML
bta00230 Purine metabolism SBML MML
bta00232 Caffeine metabolism SBML MML
bta00240 Pyrimidine metabolism SBML MML
bta00251 (Undocumented) SBML MML
bta00252 (Undocumented) SBML MML
bta00260 Glycine, serine and threonine metabolism SBML MML
bta00271 (Undocumented) SBML MML
bta00272 (Undocumented) SBML MML
bta00280 Valine, leucine and isoleucine degradation SBML MML
bta00290 Valine, leucine and isoleucine biosynthesis SBML MML
bta00310 Lysine degradation SBML MML
bta00330 Arginine and proline metabolism SBML MML
bta00340 Histidine metabolism SBML MML
bta00350 Tyrosine metabolism SBML MML
bta00360 Phenylalanine metabolism SBML MML
bta00361 gamma-Hexachlorocyclohexane degradation SBML MML
bta00363 Bisphenol A degradation SBML MML
bta00380 Tryptophan metabolism SBML MML
bta00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
bta00410 beta-Alanine metabolism SBML MML
bta00450 Selenoamino acid metabolism SBML MML
bta00460 (Undocumented) SBML MML
bta00472 D-Arginine and D-ornithine metabolism SBML MML
bta00480 Glutathione metabolism SBML MML
bta00500 Starch and sucrose metabolism SBML MML
bta00510 (Undocumented) SBML MML
bta00520 Amino sugar and nucleotide sugar metabolism SBML MML
bta00521 Streptomycin biosynthesis SBML MML
bta00530 (Undocumented) SBML MML
bta00550 Peptidoglycan biosynthesis SBML MML
bta00561 Glycerolipid metabolism SBML MML
bta00562 Inositol phosphate metabolism SBML MML
bta00564 Glycerophospholipid metabolism SBML MML
bta00565 Ether lipid metabolism SBML MML
bta00590 Arachidonic acid metabolism SBML MML
bta00591 Linoleic acid metabolism SBML MML
bta00592 alpha-Linolenic acid metabolism SBML MML
bta00600 Sphingolipid metabolism SBML MML
bta00620 Pyruvate metabolism SBML MML
bta00624 1- and 2-Methylnaphthalene degradation SBML MML
bta00625 (Undocumented) SBML MML
bta00626 Naphthalene and anthracene degradation SBML MML
bta00630 Glyoxylate and dicarboxylate metabolism SBML MML
bta00632 (Undocumented) SBML MML
bta00640 Propanoate metabolism SBML MML
bta00641 3-Chloroacrylic acid degradation SBML MML
bta00650 Butanoate metabolism SBML MML
bta00670 One carbon pool by folate SBML MML
bta00680 Methane metabolism SBML MML
bta00710 (Undocumented) SBML MML
bta00720 (Undocumented) SBML MML
bta00730 Thiamine metabolism SBML MML
bta00740 Riboflavin metabolism SBML MML
bta00750 Vitamin B6 metabolism SBML MML
bta00760 Nicotinate and nicotinamide metabolism SBML MML
bta00770 Pantothenate and CoA biosynthesis SBML MML
bta00780 Biotin metabolism SBML MML
bta00785 Lipoic acid metabolism SBML MML
bta00790 Folate biosynthesis SBML MML
bta00830 Retinol metabolism SBML MML
bta00860 Porphyrin and chlorophyll metabolism SBML MML
bta00900 Terpenoid backbone biosynthesis SBML MML
bta00903 (Undocumented) SBML MML
bta00910 Nitrogen metabolism SBML MML
bta00920 Sulfur metabolism SBML MML
bta00930 Caprolactam degradation SBML MML
bta00940 (Undocumented) SBML MML
bta00950 (Undocumented) SBML MML
bta00960 (Undocumented) SBML MML
bta00970 Aminoacyl-tRNA biosynthesis SBML MML
bta00980 Metabolism of xenobiotics by cytochrome P450 SBML MML
bta00982 (Undocumented) SBML MML
bta00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.