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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism cal: Candida albicans

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
cal00010 Glycolysis / Gluconeogenesis SBML MML
cal00020 Citrate cycle (TCA cycle) SBML MML
cal00030 Pentose phosphate pathway SBML MML
cal00040 Pentose and glucuronate interconversions SBML MML
cal00051 Fructose and mannose metabolism SBML MML
cal00052 Galactose metabolism SBML MML
cal00061 Fatty acid biosynthesis SBML MML
cal00071 Fatty acid metabolism SBML MML
cal00072 Synthesis and degradation of ketone bodies SBML MML
cal00100 (Undocumented) SBML MML
cal00120 (Undocumented) SBML MML
cal00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
cal00220 (Undocumented) SBML MML
cal00230 Purine metabolism SBML MML
cal00240 Pyrimidine metabolism SBML MML
cal00251 (Undocumented) SBML MML
cal00252 (Undocumented) SBML MML
cal00260 Glycine, serine and threonine metabolism SBML MML
cal00271 (Undocumented) SBML MML
cal00272 (Undocumented) SBML MML
cal00280 Valine, leucine and isoleucine degradation SBML MML
cal00281 Geraniol degradation SBML MML
cal00290 Valine, leucine and isoleucine biosynthesis SBML MML
cal00300 Lysine biosynthesis SBML MML
cal00310 Lysine degradation SBML MML
cal00330 Arginine and proline metabolism SBML MML
cal00340 Histidine metabolism SBML MML
cal00350 Tyrosine metabolism SBML MML
cal00360 Phenylalanine metabolism SBML MML
cal00362 (Undocumented) SBML MML
cal00380 Tryptophan metabolism SBML MML
cal00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
cal00450 Selenoamino acid metabolism SBML MML
cal00460 (Undocumented) SBML MML
cal00480 Glutathione metabolism SBML MML
cal00500 Starch and sucrose metabolism SBML MML
cal00510 (Undocumented) SBML MML
cal00530 (Undocumented) SBML MML
cal00562 Inositol phosphate metabolism SBML MML
cal00564 Glycerophospholipid metabolism SBML MML
cal00592 alpha-Linolenic acid metabolism SBML MML
cal00600 Sphingolipid metabolism SBML MML
cal00620 Pyruvate metabolism SBML MML
cal00624 1- and 2-Methylnaphthalene degradation SBML MML
cal00630 Glyoxylate and dicarboxylate metabolism SBML MML
cal00632 (Undocumented) SBML MML
cal00640 Propanoate metabolism SBML MML
cal00642 Ethylbenzene degradation SBML MML
cal00650 Butanoate metabolism SBML MML
cal00660 C5-Branched dibasic acid metabolism SBML MML
cal00670 One carbon pool by folate SBML MML
cal00680 Methane metabolism SBML MML
cal00710 (Undocumented) SBML MML
cal00720 (Undocumented) SBML MML
cal00750 Vitamin B6 metabolism SBML MML
cal00760 Nicotinate and nicotinamide metabolism SBML MML
cal00770 Pantothenate and CoA biosynthesis SBML MML
cal00780 Biotin metabolism SBML MML
cal00785 Lipoic acid metabolism SBML MML
cal00790 Folate biosynthesis SBML MML
cal00860 Porphyrin and chlorophyll metabolism SBML MML
cal00900 Terpenoid backbone biosynthesis SBML MML
cal00903 (Undocumented) SBML MML
cal00910 Nitrogen metabolism SBML MML
cal00920 Sulfur metabolism SBML MML
cal00960 (Undocumented) SBML MML
cal00970 Aminoacyl-tRNA biosynthesis SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.