This page will look better in a graphical browser that supports web standards, but is accessible to any browser or internet device.

Served by Samwise.

Kegg pathway models for JSim

Organism cbo: Clostridium botulinum A ATCC 3502

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
cbo00010 Glycolysis / Gluconeogenesis SBML MML
cbo00020 Citrate cycle (TCA cycle) SBML MML
cbo00030 Pentose phosphate pathway SBML MML
cbo00040 Pentose and glucuronate interconversions SBML MML
cbo00051 Fructose and mannose metabolism SBML MML
cbo00052 Galactose metabolism SBML MML
cbo00053 Ascorbate and aldarate metabolism SBML MML
cbo00061 Fatty acid biosynthesis SBML MML
cbo00071 Fatty acid metabolism SBML MML
cbo00100 (Undocumented) SBML MML
cbo00120 (Undocumented) SBML MML
cbo00220 (Undocumented) SBML MML
cbo00230 Purine metabolism SBML MML
cbo00240 Pyrimidine metabolism SBML MML
cbo00251 (Undocumented) SBML MML
cbo00252 (Undocumented) SBML MML
cbo00260 Glycine, serine and threonine metabolism SBML MML
cbo00271 (Undocumented) SBML MML
cbo00272 (Undocumented) SBML MML
cbo00280 Valine, leucine and isoleucine degradation SBML MML
cbo00290 Valine, leucine and isoleucine biosynthesis SBML MML
cbo00300 Lysine biosynthesis SBML MML
cbo00310 Lysine degradation SBML MML
cbo00330 Arginine and proline metabolism SBML MML
cbo00340 Histidine metabolism SBML MML
cbo00350 Tyrosine metabolism SBML MML
cbo00360 Phenylalanine metabolism SBML MML
cbo00362 (Undocumented) SBML MML
cbo00380 Tryptophan metabolism SBML MML
cbo00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
cbo00401 Novobiocin biosynthesis SBML MML
cbo00410 beta-Alanine metabolism SBML MML
cbo00430 Taurine and hypotaurine metabolism SBML MML
cbo00450 Selenoamino acid metabolism SBML MML
cbo00460 (Undocumented) SBML MML
cbo00471 D-Glutamine and D-glutamate metabolism SBML MML
cbo00473 D-Alanine metabolism SBML MML
cbo00500 Starch and sucrose metabolism SBML MML
cbo00510 (Undocumented) SBML MML
cbo00520 Amino sugar and nucleotide sugar metabolism SBML MML
cbo00521 Streptomycin biosynthesis SBML MML
cbo00523 Polyketide sugar unit biosynthesis SBML MML
cbo00530 (Undocumented) SBML MML
cbo00550 Peptidoglycan biosynthesis SBML MML
cbo00561 Glycerolipid metabolism SBML MML
cbo00564 Glycerophospholipid metabolism SBML MML
cbo00600 Sphingolipid metabolism SBML MML
cbo00620 Pyruvate metabolism SBML MML
cbo00624 1- and 2-Methylnaphthalene degradation SBML MML
cbo00625 (Undocumented) SBML MML
cbo00630 Glyoxylate and dicarboxylate metabolism SBML MML
cbo00631 1,2-Dichloroethane degradation SBML MML
cbo00632 (Undocumented) SBML MML
cbo00640 Propanoate metabolism SBML MML
cbo00641 3-Chloroacrylic acid degradation SBML MML
cbo00650 Butanoate metabolism SBML MML
cbo00670 One carbon pool by folate SBML MML
cbo00680 Methane metabolism SBML MML
cbo00710 (Undocumented) SBML MML
cbo00720 (Undocumented) SBML MML
cbo00730 Thiamine metabolism SBML MML
cbo00740 Riboflavin metabolism SBML MML
cbo00750 Vitamin B6 metabolism SBML MML
cbo00760 Nicotinate and nicotinamide metabolism SBML MML
cbo00770 Pantothenate and CoA biosynthesis SBML MML
cbo00780 Biotin metabolism SBML MML
cbo00790 Folate biosynthesis SBML MML
cbo00860 Porphyrin and chlorophyll metabolism SBML MML
cbo00900 Terpenoid backbone biosynthesis SBML MML
cbo00903 (Undocumented) SBML MML
cbo00910 Nitrogen metabolism SBML MML
cbo00920 Sulfur metabolism SBML MML
cbo00940 (Undocumented) SBML MML
cbo00950 (Undocumented) SBML MML
cbo00960 (Undocumented) SBML MML
cbo00970 Aminoacyl-tRNA biosynthesis SBML MML
cbo00982 (Undocumented) SBML MML
cbo00983 (Undocumented) SBML MML

Model development and archiving support at provided by the following grants: NIH U01HL122199 Analyzing the Cardiac Power Grid, 09/15/2015 - 05/31/2020, NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.