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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism cjd: Campylobacter jejuni subsp. doylei 269.97

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
cjd00010 Glycolysis / Gluconeogenesis SBML MML
cjd00020 Citrate cycle (TCA cycle) SBML MML
cjd00030 Pentose phosphate pathway SBML MML
cjd00040 Pentose and glucuronate interconversions SBML MML
cjd00051 Fructose and mannose metabolism SBML MML
cjd00052 Galactose metabolism SBML MML
cjd00061 Fatty acid biosynthesis SBML MML
cjd00100 (Undocumented) SBML MML
cjd00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
cjd00220 (Undocumented) SBML MML
cjd00230 Purine metabolism SBML MML
cjd00240 Pyrimidine metabolism SBML MML
cjd00251 (Undocumented) SBML MML
cjd00252 (Undocumented) SBML MML
cjd00260 Glycine, serine and threonine metabolism SBML MML
cjd00271 (Undocumented) SBML MML
cjd00272 (Undocumented) SBML MML
cjd00280 Valine, leucine and isoleucine degradation SBML MML
cjd00290 Valine, leucine and isoleucine biosynthesis SBML MML
cjd00300 Lysine biosynthesis SBML MML
cjd00310 Lysine degradation SBML MML
cjd00330 Arginine and proline metabolism SBML MML
cjd00340 Histidine metabolism SBML MML
cjd00350 Tyrosine metabolism SBML MML
cjd00360 Phenylalanine metabolism SBML MML
cjd00362 (Undocumented) SBML MML
cjd00380 Tryptophan metabolism SBML MML
cjd00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
cjd00401 Novobiocin biosynthesis SBML MML
cjd00410 beta-Alanine metabolism SBML MML
cjd00430 Taurine and hypotaurine metabolism SBML MML
cjd00450 Selenoamino acid metabolism SBML MML
cjd00460 (Undocumented) SBML MML
cjd00471 D-Glutamine and D-glutamate metabolism SBML MML
cjd00473 D-Alanine metabolism SBML MML
cjd00480 Glutathione metabolism SBML MML
cjd00500 Starch and sucrose metabolism SBML MML
cjd00520 Amino sugar and nucleotide sugar metabolism SBML MML
cjd00521 Streptomycin biosynthesis SBML MML
cjd00530 (Undocumented) SBML MML
cjd00540 Lipopolysaccharide biosynthesis SBML MML
cjd00550 Peptidoglycan biosynthesis SBML MML
cjd00561 Glycerolipid metabolism SBML MML
cjd00564 Glycerophospholipid metabolism SBML MML
cjd00620 Pyruvate metabolism SBML MML
cjd00628 Fluorene degradation SBML MML
cjd00630 Glyoxylate and dicarboxylate metabolism SBML MML
cjd00632 (Undocumented) SBML MML
cjd00640 Propanoate metabolism SBML MML
cjd00643 Styrene degradation SBML MML
cjd00650 Butanoate metabolism SBML MML
cjd00660 C5-Branched dibasic acid metabolism SBML MML
cjd00670 One carbon pool by folate SBML MML
cjd00680 Methane metabolism SBML MML
cjd00710 (Undocumented) SBML MML
cjd00720 (Undocumented) SBML MML
cjd00730 Thiamine metabolism SBML MML
cjd00740 Riboflavin metabolism SBML MML
cjd00750 Vitamin B6 metabolism SBML MML
cjd00760 Nicotinate and nicotinamide metabolism SBML MML
cjd00770 Pantothenate and CoA biosynthesis SBML MML
cjd00780 Biotin metabolism SBML MML
cjd00790 Folate biosynthesis SBML MML
cjd00860 Porphyrin and chlorophyll metabolism SBML MML
cjd00900 Terpenoid backbone biosynthesis SBML MML
cjd00910 Nitrogen metabolism SBML MML
cjd00920 Sulfur metabolism SBML MML
cjd00930 Caprolactam degradation SBML MML
cjd00940 (Undocumented) SBML MML
cjd00950 (Undocumented) SBML MML
cjd00970 Aminoacyl-tRNA biosynthesis SBML MML
cjd00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.