This page will look better in a graphical browser that supports web standards, but is accessible to any browser or internet device.

Served by Samwise.

Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism cpe: Clostridium perfringens 13

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
cpe00010 Glycolysis / Gluconeogenesis SBML MML
cpe00020 Citrate cycle (TCA cycle) SBML MML
cpe00030 Pentose phosphate pathway SBML MML
cpe00031 (Undocumented) SBML MML
cpe00040 Pentose and glucuronate interconversions SBML MML
cpe00051 Fructose and mannose metabolism SBML MML
cpe00052 Galactose metabolism SBML MML
cpe00053 Ascorbate and aldarate metabolism SBML MML
cpe00061 Fatty acid biosynthesis SBML MML
cpe00071 Fatty acid metabolism SBML MML
cpe00100 (Undocumented) SBML MML
cpe00120 (Undocumented) SBML MML
cpe00220 (Undocumented) SBML MML
cpe00230 Purine metabolism SBML MML
cpe00240 Pyrimidine metabolism SBML MML
cpe00251 (Undocumented) SBML MML
cpe00252 (Undocumented) SBML MML
cpe00260 Glycine, serine and threonine metabolism SBML MML
cpe00271 (Undocumented) SBML MML
cpe00272 (Undocumented) SBML MML
cpe00280 Valine, leucine and isoleucine degradation SBML MML
cpe00281 Geraniol degradation SBML MML
cpe00290 Valine, leucine and isoleucine biosynthesis SBML MML
cpe00300 Lysine biosynthesis SBML MML
cpe00310 Lysine degradation SBML MML
cpe00311 Penicillin and cephalosporin biosynthesis SBML MML
cpe00330 Arginine and proline metabolism SBML MML
cpe00340 Histidine metabolism SBML MML
cpe00350 Tyrosine metabolism SBML MML
cpe00360 Phenylalanine metabolism SBML MML
cpe00380 Tryptophan metabolism SBML MML
cpe00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
cpe00401 Novobiocin biosynthesis SBML MML
cpe00410 beta-Alanine metabolism SBML MML
cpe00430 Taurine and hypotaurine metabolism SBML MML
cpe00440 Phosphonate and phosphinate metabolism SBML MML
cpe00450 Selenoamino acid metabolism SBML MML
cpe00460 (Undocumented) SBML MML
cpe00471 D-Glutamine and D-glutamate metabolism SBML MML
cpe00473 D-Alanine metabolism SBML MML
cpe00480 Glutathione metabolism SBML MML
cpe00500 Starch and sucrose metabolism SBML MML
cpe00520 Amino sugar and nucleotide sugar metabolism SBML MML
cpe00521 Streptomycin biosynthesis SBML MML
cpe00523 Polyketide sugar unit biosynthesis SBML MML
cpe00530 (Undocumented) SBML MML
cpe00550 Peptidoglycan biosynthesis SBML MML
cpe00561 Glycerolipid metabolism SBML MML
cpe00562 Inositol phosphate metabolism SBML MML
cpe00564 Glycerophospholipid metabolism SBML MML
cpe00565 Ether lipid metabolism SBML MML
cpe00590 Arachidonic acid metabolism SBML MML
cpe00600 Sphingolipid metabolism SBML MML
cpe00620 Pyruvate metabolism SBML MML
cpe00624 1- and 2-Methylnaphthalene degradation SBML MML
cpe00630 Glyoxylate and dicarboxylate metabolism SBML MML
cpe00632 (Undocumented) SBML MML
cpe00640 Propanoate metabolism SBML MML
cpe00641 3-Chloroacrylic acid degradation SBML MML
cpe00650 Butanoate metabolism SBML MML
cpe00670 One carbon pool by folate SBML MML
cpe00710 (Undocumented) SBML MML
cpe00730 Thiamine metabolism SBML MML
cpe00740 Riboflavin metabolism SBML MML
cpe00750 Vitamin B6 metabolism SBML MML
cpe00760 Nicotinate and nicotinamide metabolism SBML MML
cpe00770 Pantothenate and CoA biosynthesis SBML MML
cpe00780 Biotin metabolism SBML MML
cpe00790 Folate biosynthesis SBML MML
cpe00860 Porphyrin and chlorophyll metabolism SBML MML
cpe00900 Terpenoid backbone biosynthesis SBML MML
cpe00910 Nitrogen metabolism SBML MML
cpe00920 Sulfur metabolism SBML MML
cpe00970 Aminoacyl-tRNA biosynthesis SBML MML
cpe00982 (Undocumented) SBML MML
cpe00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.