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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism daag: (Undocumented)

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
daag00010 Glycolysis / Gluconeogenesis SBML MML
daag00020 Citrate cycle (TCA cycle) SBML MML
daag00030 Pentose phosphate pathway SBML MML
daag00031 (Undocumented) SBML MML
daag00040 Pentose and glucuronate interconversions SBML MML
daag00051 Fructose and mannose metabolism SBML MML
daag00052 Galactose metabolism SBML MML
daag00053 Ascorbate and aldarate metabolism SBML MML
daag00061 Fatty acid biosynthesis SBML MML
daag00062 Fatty acid elongation in mitochondria SBML MML
daag00071 Fatty acid metabolism SBML MML
daag00072 Synthesis and degradation of ketone bodies SBML MML
daag00100 (Undocumented) SBML MML
daag00120 (Undocumented) SBML MML
daag00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
daag00150 Androgen and estrogen metabolism SBML MML
daag00220 (Undocumented) SBML MML
daag00230 Purine metabolism SBML MML
daag00240 Pyrimidine metabolism SBML MML
daag00251 (Undocumented) SBML MML
daag00252 (Undocumented) SBML MML
daag00260 Glycine, serine and threonine metabolism SBML MML
daag00271 (Undocumented) SBML MML
daag00272 (Undocumented) SBML MML
daag00280 Valine, leucine and isoleucine degradation SBML MML
daag00281 Geraniol degradation SBML MML
daag00290 Valine, leucine and isoleucine biosynthesis SBML MML
daag00300 Lysine biosynthesis SBML MML
daag00310 Lysine degradation SBML MML
daag00330 Arginine and proline metabolism SBML MML
daag00340 Histidine metabolism SBML MML
daag00350 Tyrosine metabolism SBML MML
daag00351 1,1,1-Trichloro-2,2-bis(4-chlorophenyl)ethane (DDT) degradation SBML MML
daag00360 Phenylalanine metabolism SBML MML
daag00361 gamma-Hexachlorocyclohexane degradation SBML MML
daag00362 (Undocumented) SBML MML
daag00363 Bisphenol A degradation SBML MML
daag00364 Fluorobenzoate degradation SBML MML
daag00380 Tryptophan metabolism SBML MML
daag00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
daag00401 Novobiocin biosynthesis SBML MML
daag00410 beta-Alanine metabolism SBML MML
daag00430 Taurine and hypotaurine metabolism SBML MML
daag00440 Phosphonate and phosphinate metabolism SBML MML
daag00450 Selenoamino acid metabolism SBML MML
daag00460 (Undocumented) SBML MML
daag00471 D-Glutamine and D-glutamate metabolism SBML MML
daag00472 D-Arginine and D-ornithine metabolism SBML MML
daag00480 Glutathione metabolism SBML MML
daag00500 Starch and sucrose metabolism SBML MML
daag00510 (Undocumented) SBML MML
daag00520 Amino sugar and nucleotide sugar metabolism SBML MML
daag00521 Streptomycin biosynthesis SBML MML
daag00530 (Undocumented) SBML MML
daag00550 Peptidoglycan biosynthesis SBML MML
daag00561 Glycerolipid metabolism SBML MML
daag00562 Inositol phosphate metabolism SBML MML
daag00564 Glycerophospholipid metabolism SBML MML
daag00565 Ether lipid metabolism SBML MML
daag00590 Arachidonic acid metabolism SBML MML
daag00591 Linoleic acid metabolism SBML MML
daag00592 alpha-Linolenic acid metabolism SBML MML
daag00600 Sphingolipid metabolism SBML MML
daag00620 Pyruvate metabolism SBML MML
daag00624 1- and 2-Methylnaphthalene degradation SBML MML
daag00626 Naphthalene and anthracene degradation SBML MML
daag00627 1,4-Dichlorobenzene degradation SBML MML
daag00628 Fluorene degradation SBML MML
daag00630 Glyoxylate and dicarboxylate metabolism SBML MML
daag00632 (Undocumented) SBML MML
daag00640 Propanoate metabolism SBML MML
daag00641 3-Chloroacrylic acid degradation SBML MML
daag00643 Styrene degradation SBML MML
daag00650 Butanoate metabolism SBML MML
daag00660 C5-Branched dibasic acid metabolism SBML MML
daag00670 One carbon pool by folate SBML MML
daag00680 Methane metabolism SBML MML
daag00710 (Undocumented) SBML MML
daag00720 (Undocumented) SBML MML
daag00730 Thiamine metabolism SBML MML
daag00740 Riboflavin metabolism SBML MML
daag00750 Vitamin B6 metabolism SBML MML
daag00760 Nicotinate and nicotinamide metabolism SBML MML
daag00770 Pantothenate and CoA biosynthesis SBML MML
daag00780 Biotin metabolism SBML MML
daag00790 Folate biosynthesis SBML MML
daag00860 Porphyrin and chlorophyll metabolism SBML MML
daag00900 Terpenoid backbone biosynthesis SBML MML
daag00901 (Undocumented) SBML MML
daag00903 (Undocumented) SBML MML
daag00910 Nitrogen metabolism SBML MML
daag00920 Sulfur metabolism SBML MML
daag00930 Caprolactam degradation SBML MML
daag00940 (Undocumented) SBML MML
daag00950 (Undocumented) SBML MML
daag00960 (Undocumented) SBML MML
daag00970 Aminoacyl-tRNA biosynthesis SBML MML
daag00980 Metabolism of xenobiotics by cytochrome P450 SBML MML
daag00981 (Undocumented) SBML MML
daag00982 (Undocumented) SBML MML
daag00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.