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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism dha: Debaryomyces hansenii

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
dha00010 Glycolysis / Gluconeogenesis SBML MML
dha00020 Citrate cycle (TCA cycle) SBML MML
dha00030 Pentose phosphate pathway SBML MML
dha00031 (Undocumented) SBML MML
dha00040 Pentose and glucuronate interconversions SBML MML
dha00051 Fructose and mannose metabolism SBML MML
dha00052 Galactose metabolism SBML MML
dha00061 Fatty acid biosynthesis SBML MML
dha00062 Fatty acid elongation in mitochondria SBML MML
dha00071 Fatty acid metabolism SBML MML
dha00072 Synthesis and degradation of ketone bodies SBML MML
dha00100 (Undocumented) SBML MML
dha00120 (Undocumented) SBML MML
dha00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
dha00150 Androgen and estrogen metabolism SBML MML
dha00220 (Undocumented) SBML MML
dha00230 Purine metabolism SBML MML
dha00240 Pyrimidine metabolism SBML MML
dha00251 (Undocumented) SBML MML
dha00252 (Undocumented) SBML MML
dha00260 Glycine, serine and threonine metabolism SBML MML
dha00271 (Undocumented) SBML MML
dha00272 (Undocumented) SBML MML
dha00280 Valine, leucine and isoleucine degradation SBML MML
dha00281 Geraniol degradation SBML MML
dha00290 Valine, leucine and isoleucine biosynthesis SBML MML
dha00300 Lysine biosynthesis SBML MML
dha00310 Lysine degradation SBML MML
dha00330 Arginine and proline metabolism SBML MML
dha00340 Histidine metabolism SBML MML
dha00350 Tyrosine metabolism SBML MML
dha00351 1,1,1-Trichloro-2,2-bis(4-chlorophenyl)ethane (DDT) degradation SBML MML
dha00360 Phenylalanine metabolism SBML MML
dha00361 gamma-Hexachlorocyclohexane degradation SBML MML
dha00362 (Undocumented) SBML MML
dha00363 Bisphenol A degradation SBML MML
dha00364 Fluorobenzoate degradation SBML MML
dha00380 Tryptophan metabolism SBML MML
dha00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
dha00410 beta-Alanine metabolism SBML MML
dha00430 Taurine and hypotaurine metabolism SBML MML
dha00440 Phosphonate and phosphinate metabolism SBML MML
dha00450 Selenoamino acid metabolism SBML MML
dha00460 (Undocumented) SBML MML
dha00472 D-Arginine and D-ornithine metabolism SBML MML
dha00480 Glutathione metabolism SBML MML
dha00500 Starch and sucrose metabolism SBML MML
dha00510 (Undocumented) SBML MML
dha00520 Amino sugar and nucleotide sugar metabolism SBML MML
dha00521 Streptomycin biosynthesis SBML MML
dha00530 (Undocumented) SBML MML
dha00550 Peptidoglycan biosynthesis SBML MML
dha00561 Glycerolipid metabolism SBML MML
dha00562 Inositol phosphate metabolism SBML MML
dha00564 Glycerophospholipid metabolism SBML MML
dha00565 Ether lipid metabolism SBML MML
dha00590 Arachidonic acid metabolism SBML MML
dha00592 alpha-Linolenic acid metabolism SBML MML
dha00600 Sphingolipid metabolism SBML MML
dha00620 Pyruvate metabolism SBML MML
dha00622 Toluene and xylene degradation SBML MML
dha00623 2,4-Dichlorobenzoate degradation SBML MML
dha00624 1- and 2-Methylnaphthalene degradation SBML MML
dha00626 Naphthalene and anthracene degradation SBML MML
dha00627 1,4-Dichlorobenzene degradation SBML MML
dha00628 Fluorene degradation SBML MML
dha00630 Glyoxylate and dicarboxylate metabolism SBML MML
dha00632 (Undocumented) SBML MML
dha00640 Propanoate metabolism SBML MML
dha00641 3-Chloroacrylic acid degradation SBML MML
dha00642 Ethylbenzene degradation SBML MML
dha00643 Styrene degradation SBML MML
dha00650 Butanoate metabolism SBML MML
dha00660 C5-Branched dibasic acid metabolism SBML MML
dha00670 One carbon pool by folate SBML MML
dha00680 Methane metabolism SBML MML
dha00710 (Undocumented) SBML MML
dha00720 (Undocumented) SBML MML
dha00730 Thiamine metabolism SBML MML
dha00740 Riboflavin metabolism SBML MML
dha00750 Vitamin B6 metabolism SBML MML
dha00760 Nicotinate and nicotinamide metabolism SBML MML
dha00770 Pantothenate and CoA biosynthesis SBML MML
dha00780 Biotin metabolism SBML MML
dha00785 Lipoic acid metabolism SBML MML
dha00790 Folate biosynthesis SBML MML
dha00860 Porphyrin and chlorophyll metabolism SBML MML
dha00900 Terpenoid backbone biosynthesis SBML MML
dha00903 (Undocumented) SBML MML
dha00910 Nitrogen metabolism SBML MML
dha00920 Sulfur metabolism SBML MML
dha00930 Caprolactam degradation SBML MML
dha00940 (Undocumented) SBML MML
dha00941 (Undocumented) SBML MML
dha00960 (Undocumented) SBML MML
dha00970 Aminoacyl-tRNA biosynthesis SBML MML
dha00980 Metabolism of xenobiotics by cytochrome P450 SBML MML
dha00982 (Undocumented) SBML MML
dha00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.