This page will look better in a graphical browser that supports web standards, but is accessible to any browser or internet device.

Served by Samwise.

Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism dra: Deinococcus radiodurans

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
dra00010 Glycolysis / Gluconeogenesis SBML MML
dra00020 Citrate cycle (TCA cycle) SBML MML
dra00030 Pentose phosphate pathway SBML MML
dra00051 Fructose and mannose metabolism SBML MML
dra00052 Galactose metabolism SBML MML
dra00061 Fatty acid biosynthesis SBML MML
dra00062 Fatty acid elongation in mitochondria SBML MML
dra00071 Fatty acid metabolism SBML MML
dra00072 Synthesis and degradation of ketone bodies SBML MML
dra00100 (Undocumented) SBML MML
dra00120 (Undocumented) SBML MML
dra00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
dra00220 (Undocumented) SBML MML
dra00230 Purine metabolism SBML MML
dra00240 Pyrimidine metabolism SBML MML
dra00251 (Undocumented) SBML MML
dra00252 (Undocumented) SBML MML
dra00260 Glycine, serine and threonine metabolism SBML MML
dra00271 (Undocumented) SBML MML
dra00272 (Undocumented) SBML MML
dra00280 Valine, leucine and isoleucine degradation SBML MML
dra00281 Geraniol degradation SBML MML
dra00290 Valine, leucine and isoleucine biosynthesis SBML MML
dra00300 Lysine biosynthesis SBML MML
dra00310 Lysine degradation SBML MML
dra00330 Arginine and proline metabolism SBML MML
dra00340 Histidine metabolism SBML MML
dra00350 Tyrosine metabolism SBML MML
dra00360 Phenylalanine metabolism SBML MML
dra00362 (Undocumented) SBML MML
dra00380 Tryptophan metabolism SBML MML
dra00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
dra00401 Novobiocin biosynthesis SBML MML
dra00410 beta-Alanine metabolism SBML MML
dra00430 Taurine and hypotaurine metabolism SBML MML
dra00450 Selenoamino acid metabolism SBML MML
dra00460 (Undocumented) SBML MML
dra00471 D-Glutamine and D-glutamate metabolism SBML MML
dra00473 D-Alanine metabolism SBML MML
dra00480 Glutathione metabolism SBML MML
dra00500 Starch and sucrose metabolism SBML MML
dra00520 Amino sugar and nucleotide sugar metabolism SBML MML
dra00521 Streptomycin biosynthesis SBML MML
dra00523 Polyketide sugar unit biosynthesis SBML MML
dra00530 (Undocumented) SBML MML
dra00550 Peptidoglycan biosynthesis SBML MML
dra00561 Glycerolipid metabolism SBML MML
dra00564 Glycerophospholipid metabolism SBML MML
dra00620 Pyruvate metabolism SBML MML
dra00624 1- and 2-Methylnaphthalene degradation SBML MML
dra00630 Glyoxylate and dicarboxylate metabolism SBML MML
dra00632 (Undocumented) SBML MML
dra00640 Propanoate metabolism SBML MML
dra00641 3-Chloroacrylic acid degradation SBML MML
dra00643 Styrene degradation SBML MML
dra00650 Butanoate metabolism SBML MML
dra00660 C5-Branched dibasic acid metabolism SBML MML
dra00670 One carbon pool by folate SBML MML
dra00680 Methane metabolism SBML MML
dra00710 (Undocumented) SBML MML
dra00720 (Undocumented) SBML MML
dra00730 Thiamine metabolism SBML MML
dra00740 Riboflavin metabolism SBML MML
dra00750 Vitamin B6 metabolism SBML MML
dra00760 Nicotinate and nicotinamide metabolism SBML MML
dra00770 Pantothenate and CoA biosynthesis SBML MML
dra00780 Biotin metabolism SBML MML
dra00785 Lipoic acid metabolism SBML MML
dra00790 Folate biosynthesis SBML MML
dra00860 Porphyrin and chlorophyll metabolism SBML MML
dra00900 Terpenoid backbone biosynthesis SBML MML
dra00903 (Undocumented) SBML MML
dra00906 Carotenoid biosynthesis SBML MML
dra00910 Nitrogen metabolism SBML MML
dra00920 Sulfur metabolism SBML MML
dra00930 Caprolactam degradation SBML MML
dra00940 (Undocumented) SBML MML
dra00941 (Undocumented) SBML MML
dra00950 (Undocumented) SBML MML
dra00960 (Undocumented) SBML MML
dra00970 Aminoacyl-tRNA biosynthesis SBML MML
dra00982 (Undocumented) SBML MML
dra00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.