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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism dtps: (Undocumented)

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
dtps00010 Glycolysis / Gluconeogenesis SBML MML
dtps00020 Citrate cycle (TCA cycle) SBML MML
dtps00030 Pentose phosphate pathway SBML MML
dtps00031 (Undocumented) SBML MML
dtps00040 Pentose and glucuronate interconversions SBML MML
dtps00051 Fructose and mannose metabolism SBML MML
dtps00052 Galactose metabolism SBML MML
dtps00053 Ascorbate and aldarate metabolism SBML MML
dtps00061 Fatty acid biosynthesis SBML MML
dtps00062 Fatty acid elongation in mitochondria SBML MML
dtps00071 Fatty acid metabolism SBML MML
dtps00072 Synthesis and degradation of ketone bodies SBML MML
dtps00100 (Undocumented) SBML MML
dtps00120 (Undocumented) SBML MML
dtps00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
dtps00140 (Undocumented) SBML MML
dtps00150 Androgen and estrogen metabolism SBML MML
dtps00220 (Undocumented) SBML MML
dtps00230 Purine metabolism SBML MML
dtps00240 Pyrimidine metabolism SBML MML
dtps00251 (Undocumented) SBML MML
dtps00252 (Undocumented) SBML MML
dtps00260 Glycine, serine and threonine metabolism SBML MML
dtps00271 (Undocumented) SBML MML
dtps00272 (Undocumented) SBML MML
dtps00280 Valine, leucine and isoleucine degradation SBML MML
dtps00281 Geraniol degradation SBML MML
dtps00290 Valine, leucine and isoleucine biosynthesis SBML MML
dtps00300 Lysine biosynthesis SBML MML
dtps00310 Lysine degradation SBML MML
dtps00330 Arginine and proline metabolism SBML MML
dtps00340 Histidine metabolism SBML MML
dtps00350 Tyrosine metabolism SBML MML
dtps00360 Phenylalanine metabolism SBML MML
dtps00361 gamma-Hexachlorocyclohexane degradation SBML MML
dtps00363 Bisphenol A degradation SBML MML
dtps00380 Tryptophan metabolism SBML MML
dtps00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
dtps00401 Novobiocin biosynthesis SBML MML
dtps00410 beta-Alanine metabolism SBML MML
dtps00430 Taurine and hypotaurine metabolism SBML MML
dtps00440 Phosphonate and phosphinate metabolism SBML MML
dtps00450 Selenoamino acid metabolism SBML MML
dtps00460 (Undocumented) SBML MML
dtps00471 D-Glutamine and D-glutamate metabolism SBML MML
dtps00472 D-Arginine and D-ornithine metabolism SBML MML
dtps00480 Glutathione metabolism SBML MML
dtps00500 Starch and sucrose metabolism SBML MML
dtps00510 (Undocumented) SBML MML
dtps00520 Amino sugar and nucleotide sugar metabolism SBML MML
dtps00521 Streptomycin biosynthesis SBML MML
dtps00530 (Undocumented) SBML MML
dtps00550 Peptidoglycan biosynthesis SBML MML
dtps00561 Glycerolipid metabolism SBML MML
dtps00562 Inositol phosphate metabolism SBML MML
dtps00564 Glycerophospholipid metabolism SBML MML
dtps00565 Ether lipid metabolism SBML MML
dtps00590 Arachidonic acid metabolism SBML MML
dtps00591 Linoleic acid metabolism SBML MML
dtps00592 alpha-Linolenic acid metabolism SBML MML
dtps00600 Sphingolipid metabolism SBML MML
dtps00620 Pyruvate metabolism SBML MML
dtps00624 1- and 2-Methylnaphthalene degradation SBML MML
dtps00626 Naphthalene and anthracene degradation SBML MML
dtps00630 Glyoxylate and dicarboxylate metabolism SBML MML
dtps00632 (Undocumented) SBML MML
dtps00640 Propanoate metabolism SBML MML
dtps00641 3-Chloroacrylic acid degradation SBML MML
dtps00642 Ethylbenzene degradation SBML MML
dtps00643 Styrene degradation SBML MML
dtps00650 Butanoate metabolism SBML MML
dtps00660 C5-Branched dibasic acid metabolism SBML MML
dtps00670 One carbon pool by folate SBML MML
dtps00680 Methane metabolism SBML MML
dtps00710 (Undocumented) SBML MML
dtps00720 (Undocumented) SBML MML
dtps00730 Thiamine metabolism SBML MML
dtps00740 Riboflavin metabolism SBML MML
dtps00750 Vitamin B6 metabolism SBML MML
dtps00760 Nicotinate and nicotinamide metabolism SBML MML
dtps00770 Pantothenate and CoA biosynthesis SBML MML
dtps00780 Biotin metabolism SBML MML
dtps00790 Folate biosynthesis SBML MML
dtps00791 Atrazine degradation SBML MML
dtps00860 Porphyrin and chlorophyll metabolism SBML MML
dtps00900 Terpenoid backbone biosynthesis SBML MML
dtps00903 (Undocumented) SBML MML
dtps00910 Nitrogen metabolism SBML MML
dtps00920 Sulfur metabolism SBML MML
dtps00930 Caprolactam degradation SBML MML
dtps00940 (Undocumented) SBML MML
dtps00944 (Undocumented) SBML MML
dtps00950 (Undocumented) SBML MML
dtps00960 (Undocumented) SBML MML
dtps00970 Aminoacyl-tRNA biosynthesis SBML MML
dtps00980 Metabolism of xenobiotics by cytochrome P450 SBML MML
dtps00982 (Undocumented) SBML MML
dtps00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.