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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism eacp: (Undocumented)

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
eacp00010 Glycolysis / Gluconeogenesis SBML MML
eacp00020 Citrate cycle (TCA cycle) SBML MML
eacp00030 Pentose phosphate pathway SBML MML
eacp00031 (Undocumented) SBML MML
eacp00040 Pentose and glucuronate interconversions SBML MML
eacp00051 Fructose and mannose metabolism SBML MML
eacp00052 Galactose metabolism SBML MML
eacp00053 Ascorbate and aldarate metabolism SBML MML
eacp00061 Fatty acid biosynthesis SBML MML
eacp00071 Fatty acid metabolism SBML MML
eacp00072 Synthesis and degradation of ketone bodies SBML MML
eacp00100 (Undocumented) SBML MML
eacp00120 (Undocumented) SBML MML
eacp00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
eacp00150 Androgen and estrogen metabolism SBML MML
eacp00220 (Undocumented) SBML MML
eacp00230 Purine metabolism SBML MML
eacp00240 Pyrimidine metabolism SBML MML
eacp00251 (Undocumented) SBML MML
eacp00252 (Undocumented) SBML MML
eacp00260 Glycine, serine and threonine metabolism SBML MML
eacp00271 (Undocumented) SBML MML
eacp00272 (Undocumented) SBML MML
eacp00280 Valine, leucine and isoleucine degradation SBML MML
eacp00281 Geraniol degradation SBML MML
eacp00290 Valine, leucine and isoleucine biosynthesis SBML MML
eacp00300 Lysine biosynthesis SBML MML
eacp00310 Lysine degradation SBML MML
eacp00330 Arginine and proline metabolism SBML MML
eacp00340 Histidine metabolism SBML MML
eacp00350 Tyrosine metabolism SBML MML
eacp00351 1,1,1-Trichloro-2,2-bis(4-chlorophenyl)ethane (DDT) degradation SBML MML
eacp00360 Phenylalanine metabolism SBML MML
eacp00361 gamma-Hexachlorocyclohexane degradation SBML MML
eacp00362 (Undocumented) SBML MML
eacp00380 Tryptophan metabolism SBML MML
eacp00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
eacp00401 Novobiocin biosynthesis SBML MML
eacp00410 beta-Alanine metabolism SBML MML
eacp00430 Taurine and hypotaurine metabolism SBML MML
eacp00440 Phosphonate and phosphinate metabolism SBML MML
eacp00450 Selenoamino acid metabolism SBML MML
eacp00460 (Undocumented) SBML MML
eacp00480 Glutathione metabolism SBML MML
eacp00500 Starch and sucrose metabolism SBML MML
eacp00510 (Undocumented) SBML MML
eacp00520 Amino sugar and nucleotide sugar metabolism SBML MML
eacp00521 Streptomycin biosynthesis SBML MML
eacp00530 (Undocumented) SBML MML
eacp00540 Lipopolysaccharide biosynthesis SBML MML
eacp00550 Peptidoglycan biosynthesis SBML MML
eacp00561 Glycerolipid metabolism SBML MML
eacp00562 Inositol phosphate metabolism SBML MML
eacp00564 Glycerophospholipid metabolism SBML MML
eacp00565 Ether lipid metabolism SBML MML
eacp00590 Arachidonic acid metabolism SBML MML
eacp00591 Linoleic acid metabolism SBML MML
eacp00592 alpha-Linolenic acid metabolism SBML MML
eacp00600 Sphingolipid metabolism SBML MML
eacp00620 Pyruvate metabolism SBML MML
eacp00624 1- and 2-Methylnaphthalene degradation SBML MML
eacp00626 Naphthalene and anthracene degradation SBML MML
eacp00628 Fluorene degradation SBML MML
eacp00630 Glyoxylate and dicarboxylate metabolism SBML MML
eacp00632 (Undocumented) SBML MML
eacp00640 Propanoate metabolism SBML MML
eacp00641 3-Chloroacrylic acid degradation SBML MML
eacp00643 Styrene degradation SBML MML
eacp00650 Butanoate metabolism SBML MML
eacp00670 One carbon pool by folate SBML MML
eacp00680 Methane metabolism SBML MML
eacp00710 (Undocumented) SBML MML
eacp00720 (Undocumented) SBML MML
eacp00730 Thiamine metabolism SBML MML
eacp00740 Riboflavin metabolism SBML MML
eacp00750 Vitamin B6 metabolism SBML MML
eacp00760 Nicotinate and nicotinamide metabolism SBML MML
eacp00770 Pantothenate and CoA biosynthesis SBML MML
eacp00780 Biotin metabolism SBML MML
eacp00790 Folate biosynthesis SBML MML
eacp00860 Porphyrin and chlorophyll metabolism SBML MML
eacp00900 Terpenoid backbone biosynthesis SBML MML
eacp00901 (Undocumented) SBML MML
eacp00903 (Undocumented) SBML MML
eacp00904 (Undocumented) SBML MML
eacp00906 Carotenoid biosynthesis SBML MML
eacp00908 (Undocumented) SBML MML
eacp00910 Nitrogen metabolism SBML MML
eacp00920 Sulfur metabolism SBML MML
eacp00930 Caprolactam degradation SBML MML
eacp00940 (Undocumented) SBML MML
eacp00941 (Undocumented) SBML MML
eacp00944 (Undocumented) SBML MML
eacp00950 (Undocumented) SBML MML
eacp00960 (Undocumented) SBML MML
eacp00970 Aminoacyl-tRNA biosynthesis SBML MML
eacp00980 Metabolism of xenobiotics by cytochrome P450 SBML MML
eacp00982 (Undocumented) SBML MML
eacp00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.