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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism ech: Ehrlichia chaffeensis

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
ech00010 Glycolysis / Gluconeogenesis SBML MML
ech00020 Citrate cycle (TCA cycle) SBML MML
ech00030 Pentose phosphate pathway SBML MML
ech00051 Fructose and mannose metabolism SBML MML
ech00061 Fatty acid biosynthesis SBML MML
ech00100 (Undocumented) SBML MML
ech00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
ech00220 (Undocumented) SBML MML
ech00230 Purine metabolism SBML MML
ech00240 Pyrimidine metabolism SBML MML
ech00251 (Undocumented) SBML MML
ech00252 (Undocumented) SBML MML
ech00260 Glycine, serine and threonine metabolism SBML MML
ech00271 (Undocumented) SBML MML
ech00272 (Undocumented) SBML MML
ech00280 Valine, leucine and isoleucine degradation SBML MML
ech00281 Geraniol degradation SBML MML
ech00290 Valine, leucine and isoleucine biosynthesis SBML MML
ech00300 Lysine biosynthesis SBML MML
ech00310 Lysine degradation SBML MML
ech00330 Arginine and proline metabolism SBML MML
ech00340 Histidine metabolism SBML MML
ech00350 Tyrosine metabolism SBML MML
ech00360 Phenylalanine metabolism SBML MML
ech00380 Tryptophan metabolism SBML MML
ech00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
ech00450 Selenoamino acid metabolism SBML MML
ech00480 Glutathione metabolism SBML MML
ech00550 Peptidoglycan biosynthesis SBML MML
ech00562 Inositol phosphate metabolism SBML MML
ech00564 Glycerophospholipid metabolism SBML MML
ech00620 Pyruvate metabolism SBML MML
ech00624 1- and 2-Methylnaphthalene degradation SBML MML
ech00626 Naphthalene and anthracene degradation SBML MML
ech00630 Glyoxylate and dicarboxylate metabolism SBML MML
ech00632 (Undocumented) SBML MML
ech00640 Propanoate metabolism SBML MML
ech00650 Butanoate metabolism SBML MML
ech00670 One carbon pool by folate SBML MML
ech00710 (Undocumented) SBML MML
ech00720 (Undocumented) SBML MML
ech00730 Thiamine metabolism SBML MML
ech00740 Riboflavin metabolism SBML MML
ech00750 Vitamin B6 metabolism SBML MML
ech00760 Nicotinate and nicotinamide metabolism SBML MML
ech00770 Pantothenate and CoA biosynthesis SBML MML
ech00780 Biotin metabolism SBML MML
ech00785 Lipoic acid metabolism SBML MML
ech00790 Folate biosynthesis SBML MML
ech00860 Porphyrin and chlorophyll metabolism SBML MML
ech00900 Terpenoid backbone biosynthesis SBML MML
ech00903 (Undocumented) SBML MML
ech00960 (Undocumented) SBML MML
ech00970 Aminoacyl-tRNA biosynthesis SBML MML
ech00980 Metabolism of xenobiotics by cytochrome P450 SBML MML
ech00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.