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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism elsi: Lactuca saligna (willow-leaf lettuce) (EST)

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
elsi00010 Glycolysis / Gluconeogenesis SBML MML
elsi00020 Citrate cycle (TCA cycle) SBML MML
elsi00030 Pentose phosphate pathway SBML MML
elsi00031 (Undocumented) SBML MML
elsi00040 Pentose and glucuronate interconversions SBML MML
elsi00051 Fructose and mannose metabolism SBML MML
elsi00052 Galactose metabolism SBML MML
elsi00053 Ascorbate and aldarate metabolism SBML MML
elsi00061 Fatty acid biosynthesis SBML MML
elsi00071 Fatty acid metabolism SBML MML
elsi00072 Synthesis and degradation of ketone bodies SBML MML
elsi00100 (Undocumented) SBML MML
elsi00120 (Undocumented) SBML MML
elsi00140 (Undocumented) SBML MML
elsi00150 Androgen and estrogen metabolism SBML MML
elsi00220 (Undocumented) SBML MML
elsi00230 Purine metabolism SBML MML
elsi00232 Caffeine metabolism SBML MML
elsi00240 Pyrimidine metabolism SBML MML
elsi00251 (Undocumented) SBML MML
elsi00252 (Undocumented) SBML MML
elsi00260 Glycine, serine and threonine metabolism SBML MML
elsi00271 (Undocumented) SBML MML
elsi00272 (Undocumented) SBML MML
elsi00280 Valine, leucine and isoleucine degradation SBML MML
elsi00281 Geraniol degradation SBML MML
elsi00290 Valine, leucine and isoleucine biosynthesis SBML MML
elsi00300 Lysine biosynthesis SBML MML
elsi00310 Lysine degradation SBML MML
elsi00330 Arginine and proline metabolism SBML MML
elsi00340 Histidine metabolism SBML MML
elsi00350 Tyrosine metabolism SBML MML
elsi00351 1,1,1-Trichloro-2,2-bis(4-chlorophenyl)ethane (DDT) degradation SBML MML
elsi00360 Phenylalanine metabolism SBML MML
elsi00361 gamma-Hexachlorocyclohexane degradation SBML MML
elsi00362 (Undocumented) SBML MML
elsi00363 Bisphenol A degradation SBML MML
elsi00380 Tryptophan metabolism SBML MML
elsi00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
elsi00410 beta-Alanine metabolism SBML MML
elsi00430 Taurine and hypotaurine metabolism SBML MML
elsi00440 Phosphonate and phosphinate metabolism SBML MML
elsi00450 Selenoamino acid metabolism SBML MML
elsi00460 (Undocumented) SBML MML
elsi00480 Glutathione metabolism SBML MML
elsi00500 Starch and sucrose metabolism SBML MML
elsi00510 (Undocumented) SBML MML
elsi00520 Amino sugar and nucleotide sugar metabolism SBML MML
elsi00521 Streptomycin biosynthesis SBML MML
elsi00530 (Undocumented) SBML MML
elsi00540 Lipopolysaccharide biosynthesis SBML MML
elsi00550 Peptidoglycan biosynthesis SBML MML
elsi00561 Glycerolipid metabolism SBML MML
elsi00562 Inositol phosphate metabolism SBML MML
elsi00564 Glycerophospholipid metabolism SBML MML
elsi00565 Ether lipid metabolism SBML MML
elsi00590 Arachidonic acid metabolism SBML MML
elsi00592 alpha-Linolenic acid metabolism SBML MML
elsi00600 Sphingolipid metabolism SBML MML
elsi00620 Pyruvate metabolism SBML MML
elsi00624 1- and 2-Methylnaphthalene degradation SBML MML
elsi00626 Naphthalene and anthracene degradation SBML MML
elsi00628 Fluorene degradation SBML MML
elsi00630 Glyoxylate and dicarboxylate metabolism SBML MML
elsi00632 (Undocumented) SBML MML
elsi00640 Propanoate metabolism SBML MML
elsi00641 3-Chloroacrylic acid degradation SBML MML
elsi00642 Ethylbenzene degradation SBML MML
elsi00643 Styrene degradation SBML MML
elsi00650 Butanoate metabolism SBML MML
elsi00670 One carbon pool by folate SBML MML
elsi00680 Methane metabolism SBML MML
elsi00710 (Undocumented) SBML MML
elsi00720 (Undocumented) SBML MML
elsi00730 Thiamine metabolism SBML MML
elsi00740 Riboflavin metabolism SBML MML
elsi00750 Vitamin B6 metabolism SBML MML
elsi00760 Nicotinate and nicotinamide metabolism SBML MML
elsi00770 Pantothenate and CoA biosynthesis SBML MML
elsi00780 Biotin metabolism SBML MML
elsi00790 Folate biosynthesis SBML MML
elsi00860 Porphyrin and chlorophyll metabolism SBML MML
elsi00900 Terpenoid backbone biosynthesis SBML MML
elsi00902 Monoterpenoid biosynthesis SBML MML
elsi00903 (Undocumented) SBML MML
elsi00904 (Undocumented) SBML MML
elsi00906 Carotenoid biosynthesis SBML MML
elsi00908 (Undocumented) SBML MML
elsi00910 Nitrogen metabolism SBML MML
elsi00920 Sulfur metabolism SBML MML
elsi00930 Caprolactam degradation SBML MML
elsi00940 (Undocumented) SBML MML
elsi00941 (Undocumented) SBML MML
elsi00944 (Undocumented) SBML MML
elsi00950 (Undocumented) SBML MML
elsi00960 (Undocumented) SBML MML
elsi00970 Aminoacyl-tRNA biosynthesis SBML MML
elsi00980 Metabolism of xenobiotics by cytochrome P450 SBML MML
elsi00982 (Undocumented) SBML MML
elsi00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.