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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism emte: Molgula tectiformis (EST)

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
emte00010 Glycolysis / Gluconeogenesis SBML MML
emte00020 Citrate cycle (TCA cycle) SBML MML
emte00030 Pentose phosphate pathway SBML MML
emte00031 (Undocumented) SBML MML
emte00040 Pentose and glucuronate interconversions SBML MML
emte00051 Fructose and mannose metabolism SBML MML
emte00052 Galactose metabolism SBML MML
emte00053 Ascorbate and aldarate metabolism SBML MML
emte00061 Fatty acid biosynthesis SBML MML
emte00062 Fatty acid elongation in mitochondria SBML MML
emte00071 Fatty acid metabolism SBML MML
emte00072 Synthesis and degradation of ketone bodies SBML MML
emte00100 (Undocumented) SBML MML
emte00120 (Undocumented) SBML MML
emte00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
emte00140 (Undocumented) SBML MML
emte00150 Androgen and estrogen metabolism SBML MML
emte00220 (Undocumented) SBML MML
emte00230 Purine metabolism SBML MML
emte00240 Pyrimidine metabolism SBML MML
emte00251 (Undocumented) SBML MML
emte00252 (Undocumented) SBML MML
emte00260 Glycine, serine and threonine metabolism SBML MML
emte00271 (Undocumented) SBML MML
emte00272 (Undocumented) SBML MML
emte00280 Valine, leucine and isoleucine degradation SBML MML
emte00281 Geraniol degradation SBML MML
emte00290 Valine, leucine and isoleucine biosynthesis SBML MML
emte00300 Lysine biosynthesis SBML MML
emte00310 Lysine degradation SBML MML
emte00330 Arginine and proline metabolism SBML MML
emte00340 Histidine metabolism SBML MML
emte00350 Tyrosine metabolism SBML MML
emte00360 Phenylalanine metabolism SBML MML
emte00361 gamma-Hexachlorocyclohexane degradation SBML MML
emte00362 (Undocumented) SBML MML
emte00363 Bisphenol A degradation SBML MML
emte00380 Tryptophan metabolism SBML MML
emte00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
emte00410 beta-Alanine metabolism SBML MML
emte00430 Taurine and hypotaurine metabolism SBML MML
emte00440 Phosphonate and phosphinate metabolism SBML MML
emte00450 Selenoamino acid metabolism SBML MML
emte00460 (Undocumented) SBML MML
emte00471 D-Glutamine and D-glutamate metabolism SBML MML
emte00480 Glutathione metabolism SBML MML
emte00500 Starch and sucrose metabolism SBML MML
emte00510 (Undocumented) SBML MML
emte00520 Amino sugar and nucleotide sugar metabolism SBML MML
emte00521 Streptomycin biosynthesis SBML MML
emte00530 (Undocumented) SBML MML
emte00550 Peptidoglycan biosynthesis SBML MML
emte00561 Glycerolipid metabolism SBML MML
emte00562 Inositol phosphate metabolism SBML MML
emte00564 Glycerophospholipid metabolism SBML MML
emte00565 Ether lipid metabolism SBML MML
emte00590 Arachidonic acid metabolism SBML MML
emte00591 Linoleic acid metabolism SBML MML
emte00592 alpha-Linolenic acid metabolism SBML MML
emte00600 Sphingolipid metabolism SBML MML
emte00620 Pyruvate metabolism SBML MML
emte00622 Toluene and xylene degradation SBML MML
emte00624 1- and 2-Methylnaphthalene degradation SBML MML
emte00626 Naphthalene and anthracene degradation SBML MML
emte00627 1,4-Dichlorobenzene degradation SBML MML
emte00630 Glyoxylate and dicarboxylate metabolism SBML MML
emte00632 (Undocumented) SBML MML
emte00640 Propanoate metabolism SBML MML
emte00641 3-Chloroacrylic acid degradation SBML MML
emte00642 Ethylbenzene degradation SBML MML
emte00643 Styrene degradation SBML MML
emte00650 Butanoate metabolism SBML MML
emte00660 C5-Branched dibasic acid metabolism SBML MML
emte00670 One carbon pool by folate SBML MML
emte00680 Methane metabolism SBML MML
emte00710 (Undocumented) SBML MML
emte00720 (Undocumented) SBML MML
emte00730 Thiamine metabolism SBML MML
emte00740 Riboflavin metabolism SBML MML
emte00750 Vitamin B6 metabolism SBML MML
emte00760 Nicotinate and nicotinamide metabolism SBML MML
emte00770 Pantothenate and CoA biosynthesis SBML MML
emte00790 Folate biosynthesis SBML MML
emte00791 Atrazine degradation SBML MML
emte00860 Porphyrin and chlorophyll metabolism SBML MML
emte00900 Terpenoid backbone biosynthesis SBML MML
emte00903 (Undocumented) SBML MML
emte00904 (Undocumented) SBML MML
emte00910 Nitrogen metabolism SBML MML
emte00920 Sulfur metabolism SBML MML
emte00930 Caprolactam degradation SBML MML
emte00940 (Undocumented) SBML MML
emte00950 (Undocumented) SBML MML
emte00960 (Undocumented) SBML MML
emte00970 Aminoacyl-tRNA biosynthesis SBML MML
emte00980 Metabolism of xenobiotics by cytochrome P450 SBML MML
emte00982 (Undocumented) SBML MML
emte00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.