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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism eppi: Pinus pinaster (maritime pine) (EST)

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
eppi00010 Glycolysis / Gluconeogenesis SBML MML
eppi00020 Citrate cycle (TCA cycle) SBML MML
eppi00030 Pentose phosphate pathway SBML MML
eppi00031 (Undocumented) SBML MML
eppi00040 Pentose and glucuronate interconversions SBML MML
eppi00051 Fructose and mannose metabolism SBML MML
eppi00052 Galactose metabolism SBML MML
eppi00053 Ascorbate and aldarate metabolism SBML MML
eppi00061 Fatty acid biosynthesis SBML MML
eppi00062 Fatty acid elongation in mitochondria SBML MML
eppi00071 Fatty acid metabolism SBML MML
eppi00072 Synthesis and degradation of ketone bodies SBML MML
eppi00100 (Undocumented) SBML MML
eppi00120 (Undocumented) SBML MML
eppi00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
eppi00140 (Undocumented) SBML MML
eppi00150 Androgen and estrogen metabolism SBML MML
eppi00220 (Undocumented) SBML MML
eppi00230 Purine metabolism SBML MML
eppi00232 Caffeine metabolism SBML MML
eppi00240 Pyrimidine metabolism SBML MML
eppi00251 (Undocumented) SBML MML
eppi00252 (Undocumented) SBML MML
eppi00260 Glycine, serine and threonine metabolism SBML MML
eppi00271 (Undocumented) SBML MML
eppi00272 (Undocumented) SBML MML
eppi00280 Valine, leucine and isoleucine degradation SBML MML
eppi00281 Geraniol degradation SBML MML
eppi00290 Valine, leucine and isoleucine biosynthesis SBML MML
eppi00300 Lysine biosynthesis SBML MML
eppi00310 Lysine degradation SBML MML
eppi00330 Arginine and proline metabolism SBML MML
eppi00340 Histidine metabolism SBML MML
eppi00350 Tyrosine metabolism SBML MML
eppi00351 1,1,1-Trichloro-2,2-bis(4-chlorophenyl)ethane (DDT) degradation SBML MML
eppi00360 Phenylalanine metabolism SBML MML
eppi00361 gamma-Hexachlorocyclohexane degradation SBML MML
eppi00362 (Undocumented) SBML MML
eppi00363 Bisphenol A degradation SBML MML
eppi00380 Tryptophan metabolism SBML MML
eppi00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
eppi00410 beta-Alanine metabolism SBML MML
eppi00430 Taurine and hypotaurine metabolism SBML MML
eppi00440 Phosphonate and phosphinate metabolism SBML MML
eppi00450 Selenoamino acid metabolism SBML MML
eppi00460 (Undocumented) SBML MML
eppi00471 D-Glutamine and D-glutamate metabolism SBML MML
eppi00480 Glutathione metabolism SBML MML
eppi00500 Starch and sucrose metabolism SBML MML
eppi00510 (Undocumented) SBML MML
eppi00520 Amino sugar and nucleotide sugar metabolism SBML MML
eppi00521 Streptomycin biosynthesis SBML MML
eppi00523 Polyketide sugar unit biosynthesis SBML MML
eppi00530 (Undocumented) SBML MML
eppi00540 Lipopolysaccharide biosynthesis SBML MML
eppi00550 Peptidoglycan biosynthesis SBML MML
eppi00561 Glycerolipid metabolism SBML MML
eppi00562 Inositol phosphate metabolism SBML MML
eppi00564 Glycerophospholipid metabolism SBML MML
eppi00565 Ether lipid metabolism SBML MML
eppi00590 Arachidonic acid metabolism SBML MML
eppi00591 Linoleic acid metabolism SBML MML
eppi00592 alpha-Linolenic acid metabolism SBML MML
eppi00600 Sphingolipid metabolism SBML MML
eppi00620 Pyruvate metabolism SBML MML
eppi00624 1- and 2-Methylnaphthalene degradation SBML MML
eppi00625 (Undocumented) SBML MML
eppi00626 Naphthalene and anthracene degradation SBML MML
eppi00630 Glyoxylate and dicarboxylate metabolism SBML MML
eppi00632 (Undocumented) SBML MML
eppi00640 Propanoate metabolism SBML MML
eppi00641 3-Chloroacrylic acid degradation SBML MML
eppi00642 Ethylbenzene degradation SBML MML
eppi00643 Styrene degradation SBML MML
eppi00650 Butanoate metabolism SBML MML
eppi00670 One carbon pool by folate SBML MML
eppi00680 Methane metabolism SBML MML
eppi00710 (Undocumented) SBML MML
eppi00720 (Undocumented) SBML MML
eppi00730 Thiamine metabolism SBML MML
eppi00740 Riboflavin metabolism SBML MML
eppi00750 Vitamin B6 metabolism SBML MML
eppi00760 Nicotinate and nicotinamide metabolism SBML MML
eppi00770 Pantothenate and CoA biosynthesis SBML MML
eppi00780 Biotin metabolism SBML MML
eppi00790 Folate biosynthesis SBML MML
eppi00791 Atrazine degradation SBML MML
eppi00860 Porphyrin and chlorophyll metabolism SBML MML
eppi00900 Terpenoid backbone biosynthesis SBML MML
eppi00902 Monoterpenoid biosynthesis SBML MML
eppi00903 (Undocumented) SBML MML
eppi00904 (Undocumented) SBML MML
eppi00906 Carotenoid biosynthesis SBML MML
eppi00910 Nitrogen metabolism SBML MML
eppi00920 Sulfur metabolism SBML MML
eppi00930 Caprolactam degradation SBML MML
eppi00940 (Undocumented) SBML MML
eppi00941 (Undocumented) SBML MML
eppi00944 (Undocumented) SBML MML
eppi00960 (Undocumented) SBML MML
eppi00970 Aminoacyl-tRNA biosynthesis SBML MML
eppi00980 Metabolism of xenobiotics by cytochrome P450 SBML MML
eppi00982 (Undocumented) SBML MML
eppi00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.