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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism ftm: Francisella tularensis subsp. mediasiatica FSC147

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
ftm00010 Glycolysis / Gluconeogenesis SBML MML
ftm00020 Citrate cycle (TCA cycle) SBML MML
ftm00030 Pentose phosphate pathway SBML MML
ftm00040 Pentose and glucuronate interconversions SBML MML
ftm00051 Fructose and mannose metabolism SBML MML
ftm00052 Galactose metabolism SBML MML
ftm00061 Fatty acid biosynthesis SBML MML
ftm00062 Fatty acid elongation in mitochondria SBML MML
ftm00071 Fatty acid metabolism SBML MML
ftm00100 (Undocumented) SBML MML
ftm00120 (Undocumented) SBML MML
ftm00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
ftm00220 (Undocumented) SBML MML
ftm00230 Purine metabolism SBML MML
ftm00240 Pyrimidine metabolism SBML MML
ftm00251 (Undocumented) SBML MML
ftm00252 (Undocumented) SBML MML
ftm00260 Glycine, serine and threonine metabolism SBML MML
ftm00271 (Undocumented) SBML MML
ftm00272 (Undocumented) SBML MML
ftm00280 Valine, leucine and isoleucine degradation SBML MML
ftm00281 Geraniol degradation SBML MML
ftm00290 Valine, leucine and isoleucine biosynthesis SBML MML
ftm00300 Lysine biosynthesis SBML MML
ftm00310 Lysine degradation SBML MML
ftm00311 Penicillin and cephalosporin biosynthesis SBML MML
ftm00330 Arginine and proline metabolism SBML MML
ftm00340 Histidine metabolism SBML MML
ftm00350 Tyrosine metabolism SBML MML
ftm00360 Phenylalanine metabolism SBML MML
ftm00362 (Undocumented) SBML MML
ftm00380 Tryptophan metabolism SBML MML
ftm00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
ftm00410 beta-Alanine metabolism SBML MML
ftm00430 Taurine and hypotaurine metabolism SBML MML
ftm00450 Selenoamino acid metabolism SBML MML
ftm00460 (Undocumented) SBML MML
ftm00471 D-Glutamine and D-glutamate metabolism SBML MML
ftm00480 Glutathione metabolism SBML MML
ftm00500 Starch and sucrose metabolism SBML MML
ftm00520 Amino sugar and nucleotide sugar metabolism SBML MML
ftm00521 Streptomycin biosynthesis SBML MML
ftm00523 Polyketide sugar unit biosynthesis SBML MML
ftm00530 (Undocumented) SBML MML
ftm00540 Lipopolysaccharide biosynthesis SBML MML
ftm00550 Peptidoglycan biosynthesis SBML MML
ftm00561 Glycerolipid metabolism SBML MML
ftm00562 Inositol phosphate metabolism SBML MML
ftm00564 Glycerophospholipid metabolism SBML MML
ftm00565 Ether lipid metabolism SBML MML
ftm00590 Arachidonic acid metabolism SBML MML
ftm00592 alpha-Linolenic acid metabolism SBML MML
ftm00620 Pyruvate metabolism SBML MML
ftm00623 2,4-Dichlorobenzoate degradation SBML MML
ftm00624 1- and 2-Methylnaphthalene degradation SBML MML
ftm00630 Glyoxylate and dicarboxylate metabolism SBML MML
ftm00632 (Undocumented) SBML MML
ftm00633 Trinitrotoluene degradation SBML MML
ftm00640 Propanoate metabolism SBML MML
ftm00642 Ethylbenzene degradation SBML MML
ftm00650 Butanoate metabolism SBML MML
ftm00670 One carbon pool by folate SBML MML
ftm00680 Methane metabolism SBML MML
ftm00710 (Undocumented) SBML MML
ftm00720 (Undocumented) SBML MML
ftm00730 Thiamine metabolism SBML MML
ftm00740 Riboflavin metabolism SBML MML
ftm00750 Vitamin B6 metabolism SBML MML
ftm00760 Nicotinate and nicotinamide metabolism SBML MML
ftm00770 Pantothenate and CoA biosynthesis SBML MML
ftm00780 Biotin metabolism SBML MML
ftm00790 Folate biosynthesis SBML MML
ftm00791 Atrazine degradation SBML MML
ftm00860 Porphyrin and chlorophyll metabolism SBML MML
ftm00900 Terpenoid backbone biosynthesis SBML MML
ftm00903 (Undocumented) SBML MML
ftm00910 Nitrogen metabolism SBML MML
ftm00960 (Undocumented) SBML MML
ftm00970 Aminoacyl-tRNA biosynthesis SBML MML
ftm00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.