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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism ftw: Francisella tularensis subsp. tularensis WY96-3418

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
ftw00010 Glycolysis / Gluconeogenesis SBML MML
ftw00020 Citrate cycle (TCA cycle) SBML MML
ftw00030 Pentose phosphate pathway SBML MML
ftw00040 Pentose and glucuronate interconversions SBML MML
ftw00051 Fructose and mannose metabolism SBML MML
ftw00052 Galactose metabolism SBML MML
ftw00061 Fatty acid biosynthesis SBML MML
ftw00071 Fatty acid metabolism SBML MML
ftw00100 (Undocumented) SBML MML
ftw00120 (Undocumented) SBML MML
ftw00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
ftw00150 Androgen and estrogen metabolism SBML MML
ftw00220 (Undocumented) SBML MML
ftw00230 Purine metabolism SBML MML
ftw00240 Pyrimidine metabolism SBML MML
ftw00251 (Undocumented) SBML MML
ftw00252 (Undocumented) SBML MML
ftw00260 Glycine, serine and threonine metabolism SBML MML
ftw00271 (Undocumented) SBML MML
ftw00272 (Undocumented) SBML MML
ftw00280 Valine, leucine and isoleucine degradation SBML MML
ftw00281 Geraniol degradation SBML MML
ftw00290 Valine, leucine and isoleucine biosynthesis SBML MML
ftw00300 Lysine biosynthesis SBML MML
ftw00310 Lysine degradation SBML MML
ftw00330 Arginine and proline metabolism SBML MML
ftw00340 Histidine metabolism SBML MML
ftw00350 Tyrosine metabolism SBML MML
ftw00351 1,1,1-Trichloro-2,2-bis(4-chlorophenyl)ethane (DDT) degradation SBML MML
ftw00360 Phenylalanine metabolism SBML MML
ftw00361 gamma-Hexachlorocyclohexane degradation SBML MML
ftw00362 (Undocumented) SBML MML
ftw00363 Bisphenol A degradation SBML MML
ftw00380 Tryptophan metabolism SBML MML
ftw00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
ftw00410 beta-Alanine metabolism SBML MML
ftw00430 Taurine and hypotaurine metabolism SBML MML
ftw00440 Phosphonate and phosphinate metabolism SBML MML
ftw00450 Selenoamino acid metabolism SBML MML
ftw00460 (Undocumented) SBML MML
ftw00471 D-Glutamine and D-glutamate metabolism SBML MML
ftw00473 D-Alanine metabolism SBML MML
ftw00480 Glutathione metabolism SBML MML
ftw00500 Starch and sucrose metabolism SBML MML
ftw00520 Amino sugar and nucleotide sugar metabolism SBML MML
ftw00521 Streptomycin biosynthesis SBML MML
ftw00523 Polyketide sugar unit biosynthesis SBML MML
ftw00530 (Undocumented) SBML MML
ftw00540 Lipopolysaccharide biosynthesis SBML MML
ftw00550 Peptidoglycan biosynthesis SBML MML
ftw00561 Glycerolipid metabolism SBML MML
ftw00562 Inositol phosphate metabolism SBML MML
ftw00564 Glycerophospholipid metabolism SBML MML
ftw00565 Ether lipid metabolism SBML MML
ftw00590 Arachidonic acid metabolism SBML MML
ftw00591 Linoleic acid metabolism SBML MML
ftw00592 alpha-Linolenic acid metabolism SBML MML
ftw00600 Sphingolipid metabolism SBML MML
ftw00620 Pyruvate metabolism SBML MML
ftw00622 Toluene and xylene degradation SBML MML
ftw00624 1- and 2-Methylnaphthalene degradation SBML MML
ftw00626 Naphthalene and anthracene degradation SBML MML
ftw00627 1,4-Dichlorobenzene degradation SBML MML
ftw00630 Glyoxylate and dicarboxylate metabolism SBML MML
ftw00632 (Undocumented) SBML MML
ftw00633 Trinitrotoluene degradation SBML MML
ftw00640 Propanoate metabolism SBML MML
ftw00642 Ethylbenzene degradation SBML MML
ftw00650 Butanoate metabolism SBML MML
ftw00660 C5-Branched dibasic acid metabolism SBML MML
ftw00670 One carbon pool by folate SBML MML
ftw00680 Methane metabolism SBML MML
ftw00710 (Undocumented) SBML MML
ftw00720 (Undocumented) SBML MML
ftw00730 Thiamine metabolism SBML MML
ftw00740 Riboflavin metabolism SBML MML
ftw00750 Vitamin B6 metabolism SBML MML
ftw00760 Nicotinate and nicotinamide metabolism SBML MML
ftw00770 Pantothenate and CoA biosynthesis SBML MML
ftw00780 Biotin metabolism SBML MML
ftw00785 Lipoic acid metabolism SBML MML
ftw00790 Folate biosynthesis SBML MML
ftw00791 Atrazine degradation SBML MML
ftw00860 Porphyrin and chlorophyll metabolism SBML MML
ftw00900 Terpenoid backbone biosynthesis SBML MML
ftw00903 (Undocumented) SBML MML
ftw00910 Nitrogen metabolism SBML MML
ftw00920 Sulfur metabolism SBML MML
ftw00930 Caprolactam degradation SBML MML
ftw00940 (Undocumented) SBML MML
ftw00950 (Undocumented) SBML MML
ftw00960 (Undocumented) SBML MML
ftw00970 Aminoacyl-tRNA biosynthesis SBML MML
ftw00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.