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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism hin: Haemophilus influenzae Rd KW20 (serotype d)

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
hin00010 Glycolysis / Gluconeogenesis SBML MML
hin00020 Citrate cycle (TCA cycle) SBML MML
hin00030 Pentose phosphate pathway SBML MML
hin00040 Pentose and glucuronate interconversions SBML MML
hin00051 Fructose and mannose metabolism SBML MML
hin00052 Galactose metabolism SBML MML
hin00061 Fatty acid biosynthesis SBML MML
hin00071 Fatty acid metabolism SBML MML
hin00100 (Undocumented) SBML MML
hin00120 (Undocumented) SBML MML
hin00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
hin00220 (Undocumented) SBML MML
hin00230 Purine metabolism SBML MML
hin00240 Pyrimidine metabolism SBML MML
hin00251 (Undocumented) SBML MML
hin00252 (Undocumented) SBML MML
hin00260 Glycine, serine and threonine metabolism SBML MML
hin00271 (Undocumented) SBML MML
hin00272 (Undocumented) SBML MML
hin00280 Valine, leucine and isoleucine degradation SBML MML
hin00290 Valine, leucine and isoleucine biosynthesis SBML MML
hin00300 Lysine biosynthesis SBML MML
hin00330 Arginine and proline metabolism SBML MML
hin00340 Histidine metabolism SBML MML
hin00350 Tyrosine metabolism SBML MML
hin00360 Phenylalanine metabolism SBML MML
hin00361 gamma-Hexachlorocyclohexane degradation SBML MML
hin00363 Bisphenol A degradation SBML MML
hin00380 Tryptophan metabolism SBML MML
hin00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
hin00401 Novobiocin biosynthesis SBML MML
hin00430 Taurine and hypotaurine metabolism SBML MML
hin00450 Selenoamino acid metabolism SBML MML
hin00460 (Undocumented) SBML MML
hin00471 D-Glutamine and D-glutamate metabolism SBML MML
hin00473 D-Alanine metabolism SBML MML
hin00480 Glutathione metabolism SBML MML
hin00500 Starch and sucrose metabolism SBML MML
hin00520 Amino sugar and nucleotide sugar metabolism SBML MML
hin00521 Streptomycin biosynthesis SBML MML
hin00530 (Undocumented) SBML MML
hin00540 Lipopolysaccharide biosynthesis SBML MML
hin00550 Peptidoglycan biosynthesis SBML MML
hin00561 Glycerolipid metabolism SBML MML
hin00562 Inositol phosphate metabolism SBML MML
hin00564 Glycerophospholipid metabolism SBML MML
hin00620 Pyruvate metabolism SBML MML
hin00624 1- and 2-Methylnaphthalene degradation SBML MML
hin00630 Glyoxylate and dicarboxylate metabolism SBML MML
hin00632 (Undocumented) SBML MML
hin00640 Propanoate metabolism SBML MML
hin00641 3-Chloroacrylic acid degradation SBML MML
hin00650 Butanoate metabolism SBML MML
hin00660 C5-Branched dibasic acid metabolism SBML MML
hin00670 One carbon pool by folate SBML MML
hin00680 Methane metabolism SBML MML
hin00710 (Undocumented) SBML MML
hin00720 (Undocumented) SBML MML
hin00730 Thiamine metabolism SBML MML
hin00740 Riboflavin metabolism SBML MML
hin00750 Vitamin B6 metabolism SBML MML
hin00760 Nicotinate and nicotinamide metabolism SBML MML
hin00770 Pantothenate and CoA biosynthesis SBML MML
hin00780 Biotin metabolism SBML MML
hin00785 Lipoic acid metabolism SBML MML
hin00790 Folate biosynthesis SBML MML
hin00860 Porphyrin and chlorophyll metabolism SBML MML
hin00900 Terpenoid backbone biosynthesis SBML MML
hin00903 (Undocumented) SBML MML
hin00910 Nitrogen metabolism SBML MML
hin00920 Sulfur metabolism SBML MML
hin00940 (Undocumented) SBML MML
hin00950 (Undocumented) SBML MML
hin00970 Aminoacyl-tRNA biosynthesis SBML MML
hin00982 (Undocumented) SBML MML
hin00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.