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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism hso: Haemophilus somnus 129PT

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
hso00010 Glycolysis / Gluconeogenesis SBML MML
hso00020 Citrate cycle (TCA cycle) SBML MML
hso00030 Pentose phosphate pathway SBML MML
hso00031 (Undocumented) SBML MML
hso00040 Pentose and glucuronate interconversions SBML MML
hso00051 Fructose and mannose metabolism SBML MML
hso00052 Galactose metabolism SBML MML
hso00053 Ascorbate and aldarate metabolism SBML MML
hso00061 Fatty acid biosynthesis SBML MML
hso00100 (Undocumented) SBML MML
hso00120 (Undocumented) SBML MML
hso00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
hso00150 Androgen and estrogen metabolism SBML MML
hso00220 (Undocumented) SBML MML
hso00230 Purine metabolism SBML MML
hso00240 Pyrimidine metabolism SBML MML
hso00251 (Undocumented) SBML MML
hso00252 (Undocumented) SBML MML
hso00260 Glycine, serine and threonine metabolism SBML MML
hso00271 (Undocumented) SBML MML
hso00272 (Undocumented) SBML MML
hso00280 Valine, leucine and isoleucine degradation SBML MML
hso00290 Valine, leucine and isoleucine biosynthesis SBML MML
hso00300 Lysine biosynthesis SBML MML
hso00310 Lysine degradation SBML MML
hso00330 Arginine and proline metabolism SBML MML
hso00340 Histidine metabolism SBML MML
hso00350 Tyrosine metabolism SBML MML
hso00360 Phenylalanine metabolism SBML MML
hso00361 gamma-Hexachlorocyclohexane degradation SBML MML
hso00363 Bisphenol A degradation SBML MML
hso00380 Tryptophan metabolism SBML MML
hso00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
hso00401 Novobiocin biosynthesis SBML MML
hso00430 Taurine and hypotaurine metabolism SBML MML
hso00450 Selenoamino acid metabolism SBML MML
hso00460 (Undocumented) SBML MML
hso00471 D-Glutamine and D-glutamate metabolism SBML MML
hso00473 D-Alanine metabolism SBML MML
hso00480 Glutathione metabolism SBML MML
hso00500 Starch and sucrose metabolism SBML MML
hso00520 Amino sugar and nucleotide sugar metabolism SBML MML
hso00521 Streptomycin biosynthesis SBML MML
hso00530 (Undocumented) SBML MML
hso00540 Lipopolysaccharide biosynthesis SBML MML
hso00550 Peptidoglycan biosynthesis SBML MML
hso00561 Glycerolipid metabolism SBML MML
hso00562 Inositol phosphate metabolism SBML MML
hso00564 Glycerophospholipid metabolism SBML MML
hso00620 Pyruvate metabolism SBML MML
hso00622 Toluene and xylene degradation SBML MML
hso00624 1- and 2-Methylnaphthalene degradation SBML MML
hso00626 Naphthalene and anthracene degradation SBML MML
hso00627 1,4-Dichlorobenzene degradation SBML MML
hso00630 Glyoxylate and dicarboxylate metabolism SBML MML
hso00640 Propanoate metabolism SBML MML
hso00650 Butanoate metabolism SBML MML
hso00660 C5-Branched dibasic acid metabolism SBML MML
hso00670 One carbon pool by folate SBML MML
hso00680 Methane metabolism SBML MML
hso00710 (Undocumented) SBML MML
hso00720 (Undocumented) SBML MML
hso00730 Thiamine metabolism SBML MML
hso00740 Riboflavin metabolism SBML MML
hso00750 Vitamin B6 metabolism SBML MML
hso00760 Nicotinate and nicotinamide metabolism SBML MML
hso00770 Pantothenate and CoA biosynthesis SBML MML
hso00780 Biotin metabolism SBML MML
hso00785 Lipoic acid metabolism SBML MML
hso00790 Folate biosynthesis SBML MML
hso00791 Atrazine degradation SBML MML
hso00860 Porphyrin and chlorophyll metabolism SBML MML
hso00900 Terpenoid backbone biosynthesis SBML MML
hso00903 (Undocumented) SBML MML
hso00910 Nitrogen metabolism SBML MML
hso00920 Sulfur metabolism SBML MML
hso00930 Caprolactam degradation SBML MML
hso00940 (Undocumented) SBML MML
hso00950 (Undocumented) SBML MML
hso00970 Aminoacyl-tRNA biosynthesis SBML MML
hso00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.