This page will look better in a graphical browser that supports web standards, but is accessible to any browser or internet device.

Served by Samwise.

Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism krh: Kocuria rhizophila

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
krh00010 Glycolysis / Gluconeogenesis SBML MML
krh00020 Citrate cycle (TCA cycle) SBML MML
krh00030 Pentose phosphate pathway SBML MML
krh00031 (Undocumented) SBML MML
krh00040 Pentose and glucuronate interconversions SBML MML
krh00051 Fructose and mannose metabolism SBML MML
krh00052 Galactose metabolism SBML MML
krh00053 Ascorbate and aldarate metabolism SBML MML
krh00061 Fatty acid biosynthesis SBML MML
krh00062 Fatty acid elongation in mitochondria SBML MML
krh00071 Fatty acid metabolism SBML MML
krh00072 Synthesis and degradation of ketone bodies SBML MML
krh00100 (Undocumented) SBML MML
krh00120 (Undocumented) SBML MML
krh00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
krh00150 Androgen and estrogen metabolism SBML MML
krh00220 (Undocumented) SBML MML
krh00230 Purine metabolism SBML MML
krh00240 Pyrimidine metabolism SBML MML
krh00251 (Undocumented) SBML MML
krh00252 (Undocumented) SBML MML
krh00260 Glycine, serine and threonine metabolism SBML MML
krh00271 (Undocumented) SBML MML
krh00272 (Undocumented) SBML MML
krh00280 Valine, leucine and isoleucine degradation SBML MML
krh00281 Geraniol degradation SBML MML
krh00290 Valine, leucine and isoleucine biosynthesis SBML MML
krh00300 Lysine biosynthesis SBML MML
krh00310 Lysine degradation SBML MML
krh00330 Arginine and proline metabolism SBML MML
krh00340 Histidine metabolism SBML MML
krh00350 Tyrosine metabolism SBML MML
krh00360 Phenylalanine metabolism SBML MML
krh00361 gamma-Hexachlorocyclohexane degradation SBML MML
krh00362 (Undocumented) SBML MML
krh00363 Bisphenol A degradation SBML MML
krh00380 Tryptophan metabolism SBML MML
krh00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
krh00401 Novobiocin biosynthesis SBML MML
krh00410 beta-Alanine metabolism SBML MML
krh00430 Taurine and hypotaurine metabolism SBML MML
krh00440 Phosphonate and phosphinate metabolism SBML MML
krh00450 Selenoamino acid metabolism SBML MML
krh00460 (Undocumented) SBML MML
krh00471 D-Glutamine and D-glutamate metabolism SBML MML
krh00473 D-Alanine metabolism SBML MML
krh00480 Glutathione metabolism SBML MML
krh00500 Starch and sucrose metabolism SBML MML
krh00520 Amino sugar and nucleotide sugar metabolism SBML MML
krh00521 Streptomycin biosynthesis SBML MML
krh00523 Polyketide sugar unit biosynthesis SBML MML
krh00530 (Undocumented) SBML MML
krh00550 Peptidoglycan biosynthesis SBML MML
krh00561 Glycerolipid metabolism SBML MML
krh00562 Inositol phosphate metabolism SBML MML
krh00564 Glycerophospholipid metabolism SBML MML
krh00592 alpha-Linolenic acid metabolism SBML MML
krh00620 Pyruvate metabolism SBML MML
krh00622 Toluene and xylene degradation SBML MML
krh00624 1- and 2-Methylnaphthalene degradation SBML MML
krh00626 Naphthalene and anthracene degradation SBML MML
krh00627 1,4-Dichlorobenzene degradation SBML MML
krh00630 Glyoxylate and dicarboxylate metabolism SBML MML
krh00632 (Undocumented) SBML MML
krh00640 Propanoate metabolism SBML MML
krh00641 3-Chloroacrylic acid degradation SBML MML
krh00650 Butanoate metabolism SBML MML
krh00660 C5-Branched dibasic acid metabolism SBML MML
krh00670 One carbon pool by folate SBML MML
krh00680 Methane metabolism SBML MML
krh00710 (Undocumented) SBML MML
krh00720 (Undocumented) SBML MML
krh00730 Thiamine metabolism SBML MML
krh00740 Riboflavin metabolism SBML MML
krh00750 Vitamin B6 metabolism SBML MML
krh00760 Nicotinate and nicotinamide metabolism SBML MML
krh00770 Pantothenate and CoA biosynthesis SBML MML
krh00780 Biotin metabolism SBML MML
krh00785 Lipoic acid metabolism SBML MML
krh00790 Folate biosynthesis SBML MML
krh00860 Porphyrin and chlorophyll metabolism SBML MML
krh00900 Terpenoid backbone biosynthesis SBML MML
krh00903 (Undocumented) SBML MML
krh00906 Carotenoid biosynthesis SBML MML
krh00910 Nitrogen metabolism SBML MML
krh00920 Sulfur metabolism SBML MML
krh00930 Caprolactam degradation SBML MML
krh00941 (Undocumented) SBML MML
krh00970 Aminoacyl-tRNA biosynthesis SBML MML
krh00982 (Undocumented) SBML MML
krh00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.