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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism lci: Leuconostoc citreum

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
lci00010 Glycolysis / Gluconeogenesis SBML MML
lci00020 Citrate cycle (TCA cycle) SBML MML
lci00030 Pentose phosphate pathway SBML MML
lci00040 Pentose and glucuronate interconversions SBML MML
lci00051 Fructose and mannose metabolism SBML MML
lci00052 Galactose metabolism SBML MML
lci00061 Fatty acid biosynthesis SBML MML
lci00071 Fatty acid metabolism SBML MML
lci00072 Synthesis and degradation of ketone bodies SBML MML
lci00100 (Undocumented) SBML MML
lci00120 (Undocumented) SBML MML
lci00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
lci00220 (Undocumented) SBML MML
lci00230 Purine metabolism SBML MML
lci00240 Pyrimidine metabolism SBML MML
lci00251 (Undocumented) SBML MML
lci00252 (Undocumented) SBML MML
lci00260 Glycine, serine and threonine metabolism SBML MML
lci00271 (Undocumented) SBML MML
lci00272 (Undocumented) SBML MML
lci00280 Valine, leucine and isoleucine degradation SBML MML
lci00290 Valine, leucine and isoleucine biosynthesis SBML MML
lci00300 Lysine biosynthesis SBML MML
lci00330 Arginine and proline metabolism SBML MML
lci00340 Histidine metabolism SBML MML
lci00350 Tyrosine metabolism SBML MML
lci00360 Phenylalanine metabolism SBML MML
lci00380 Tryptophan metabolism SBML MML
lci00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
lci00401 Novobiocin biosynthesis SBML MML
lci00430 Taurine and hypotaurine metabolism SBML MML
lci00440 Phosphonate and phosphinate metabolism SBML MML
lci00450 Selenoamino acid metabolism SBML MML
lci00460 (Undocumented) SBML MML
lci00471 D-Glutamine and D-glutamate metabolism SBML MML
lci00473 D-Alanine metabolism SBML MML
lci00480 Glutathione metabolism SBML MML
lci00500 Starch and sucrose metabolism SBML MML
lci00520 Amino sugar and nucleotide sugar metabolism SBML MML
lci00521 Streptomycin biosynthesis SBML MML
lci00523 Polyketide sugar unit biosynthesis SBML MML
lci00530 (Undocumented) SBML MML
lci00550 Peptidoglycan biosynthesis SBML MML
lci00561 Glycerolipid metabolism SBML MML
lci00562 Inositol phosphate metabolism SBML MML
lci00564 Glycerophospholipid metabolism SBML MML
lci00590 Arachidonic acid metabolism SBML MML
lci00620 Pyruvate metabolism SBML MML
lci00624 1- and 2-Methylnaphthalene degradation SBML MML
lci00630 Glyoxylate and dicarboxylate metabolism SBML MML
lci00632 (Undocumented) SBML MML
lci00640 Propanoate metabolism SBML MML
lci00641 3-Chloroacrylic acid degradation SBML MML
lci00650 Butanoate metabolism SBML MML
lci00660 C5-Branched dibasic acid metabolism SBML MML
lci00670 One carbon pool by folate SBML MML
lci00710 (Undocumented) SBML MML
lci00720 (Undocumented) SBML MML
lci00730 Thiamine metabolism SBML MML
lci00740 Riboflavin metabolism SBML MML
lci00750 Vitamin B6 metabolism SBML MML
lci00760 Nicotinate and nicotinamide metabolism SBML MML
lci00770 Pantothenate and CoA biosynthesis SBML MML
lci00785 Lipoic acid metabolism SBML MML
lci00790 Folate biosynthesis SBML MML
lci00900 Terpenoid backbone biosynthesis SBML MML
lci00910 Nitrogen metabolism SBML MML
lci00920 Sulfur metabolism SBML MML
lci00960 (Undocumented) SBML MML
lci00970 Aminoacyl-tRNA biosynthesis SBML MML
lci00982 (Undocumented) SBML MML
lci00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.