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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism lhe: Lactobacillus helveticus

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
lhe00010 Glycolysis / Gluconeogenesis SBML MML
lhe00020 Citrate cycle (TCA cycle) SBML MML
lhe00030 Pentose phosphate pathway SBML MML
lhe00040 Pentose and glucuronate interconversions SBML MML
lhe00051 Fructose and mannose metabolism SBML MML
lhe00052 Galactose metabolism SBML MML
lhe00061 Fatty acid biosynthesis SBML MML
lhe00071 Fatty acid metabolism SBML MML
lhe00072 Synthesis and degradation of ketone bodies SBML MML
lhe00100 (Undocumented) SBML MML
lhe00120 (Undocumented) SBML MML
lhe00220 (Undocumented) SBML MML
lhe00230 Purine metabolism SBML MML
lhe00240 Pyrimidine metabolism SBML MML
lhe00251 (Undocumented) SBML MML
lhe00252 (Undocumented) SBML MML
lhe00260 Glycine, serine and threonine metabolism SBML MML
lhe00271 (Undocumented) SBML MML
lhe00272 (Undocumented) SBML MML
lhe00280 Valine, leucine and isoleucine degradation SBML MML
lhe00290 Valine, leucine and isoleucine biosynthesis SBML MML
lhe00300 Lysine biosynthesis SBML MML
lhe00310 Lysine degradation SBML MML
lhe00330 Arginine and proline metabolism SBML MML
lhe00340 Histidine metabolism SBML MML
lhe00350 Tyrosine metabolism SBML MML
lhe00380 Tryptophan metabolism SBML MML
lhe00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
lhe00430 Taurine and hypotaurine metabolism SBML MML
lhe00450 Selenoamino acid metabolism SBML MML
lhe00460 (Undocumented) SBML MML
lhe00471 D-Glutamine and D-glutamate metabolism SBML MML
lhe00473 D-Alanine metabolism SBML MML
lhe00480 Glutathione metabolism SBML MML
lhe00500 Starch and sucrose metabolism SBML MML
lhe00520 Amino sugar and nucleotide sugar metabolism SBML MML
lhe00530 (Undocumented) SBML MML
lhe00550 Peptidoglycan biosynthesis SBML MML
lhe00561 Glycerolipid metabolism SBML MML
lhe00564 Glycerophospholipid metabolism SBML MML
lhe00620 Pyruvate metabolism SBML MML
lhe00624 1- and 2-Methylnaphthalene degradation SBML MML
lhe00630 Glyoxylate and dicarboxylate metabolism SBML MML
lhe00632 (Undocumented) SBML MML
lhe00640 Propanoate metabolism SBML MML
lhe00650 Butanoate metabolism SBML MML
lhe00670 One carbon pool by folate SBML MML
lhe00680 Methane metabolism SBML MML
lhe00710 (Undocumented) SBML MML
lhe00720 (Undocumented) SBML MML
lhe00730 Thiamine metabolism SBML MML
lhe00750 Vitamin B6 metabolism SBML MML
lhe00760 Nicotinate and nicotinamide metabolism SBML MML
lhe00770 Pantothenate and CoA biosynthesis SBML MML
lhe00790 Folate biosynthesis SBML MML
lhe00900 Terpenoid backbone biosynthesis SBML MML
lhe00910 Nitrogen metabolism SBML MML
lhe00920 Sulfur metabolism SBML MML
lhe00960 (Undocumented) SBML MML
lhe00970 Aminoacyl-tRNA biosynthesis SBML MML
lhe00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.