This page will look better in a graphical browser that supports web standards, but is accessible to any browser or internet device.

Served by Samwise.

Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism lic: Leptospira interrogans serovar Copenhageni

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
lic00010 Glycolysis / Gluconeogenesis SBML MML
lic00020 Citrate cycle (TCA cycle) SBML MML
lic00030 Pentose phosphate pathway SBML MML
lic00040 Pentose and glucuronate interconversions SBML MML
lic00051 Fructose and mannose metabolism SBML MML
lic00052 Galactose metabolism SBML MML
lic00053 Ascorbate and aldarate metabolism SBML MML
lic00061 Fatty acid biosynthesis SBML MML
lic00062 Fatty acid elongation in mitochondria SBML MML
lic00071 Fatty acid metabolism SBML MML
lic00072 Synthesis and degradation of ketone bodies SBML MML
lic00100 (Undocumented) SBML MML
lic00120 (Undocumented) SBML MML
lic00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
lic00220 (Undocumented) SBML MML
lic00230 Purine metabolism SBML MML
lic00240 Pyrimidine metabolism SBML MML
lic00251 (Undocumented) SBML MML
lic00252 (Undocumented) SBML MML
lic00260 Glycine, serine and threonine metabolism SBML MML
lic00271 (Undocumented) SBML MML
lic00272 (Undocumented) SBML MML
lic00280 Valine, leucine and isoleucine degradation SBML MML
lic00281 Geraniol degradation SBML MML
lic00290 Valine, leucine and isoleucine biosynthesis SBML MML
lic00300 Lysine biosynthesis SBML MML
lic00310 Lysine degradation SBML MML
lic00330 Arginine and proline metabolism SBML MML
lic00340 Histidine metabolism SBML MML
lic00350 Tyrosine metabolism SBML MML
lic00360 Phenylalanine metabolism SBML MML
lic00361 gamma-Hexachlorocyclohexane degradation SBML MML
lic00362 (Undocumented) SBML MML
lic00380 Tryptophan metabolism SBML MML
lic00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
lic00401 Novobiocin biosynthesis SBML MML
lic00410 beta-Alanine metabolism SBML MML
lic00450 Selenoamino acid metabolism SBML MML
lic00460 (Undocumented) SBML MML
lic00471 D-Glutamine and D-glutamate metabolism SBML MML
lic00473 D-Alanine metabolism SBML MML
lic00480 Glutathione metabolism SBML MML
lic00500 Starch and sucrose metabolism SBML MML
lic00520 Amino sugar and nucleotide sugar metabolism SBML MML
lic00521 Streptomycin biosynthesis SBML MML
lic00523 Polyketide sugar unit biosynthesis SBML MML
lic00530 (Undocumented) SBML MML
lic00540 Lipopolysaccharide biosynthesis SBML MML
lic00550 Peptidoglycan biosynthesis SBML MML
lic00561 Glycerolipid metabolism SBML MML
lic00562 Inositol phosphate metabolism SBML MML
lic00564 Glycerophospholipid metabolism SBML MML
lic00590 Arachidonic acid metabolism SBML MML
lic00592 alpha-Linolenic acid metabolism SBML MML
lic00600 Sphingolipid metabolism SBML MML
lic00620 Pyruvate metabolism SBML MML
lic00624 1- and 2-Methylnaphthalene degradation SBML MML
lic00630 Glyoxylate and dicarboxylate metabolism SBML MML
lic00631 1,2-Dichloroethane degradation SBML MML
lic00632 (Undocumented) SBML MML
lic00640 Propanoate metabolism SBML MML
lic00641 3-Chloroacrylic acid degradation SBML MML
lic00642 Ethylbenzene degradation SBML MML
lic00643 Styrene degradation SBML MML
lic00650 Butanoate metabolism SBML MML
lic00660 C5-Branched dibasic acid metabolism SBML MML
lic00670 One carbon pool by folate SBML MML
lic00680 Methane metabolism SBML MML
lic00710 (Undocumented) SBML MML
lic00720 (Undocumented) SBML MML
lic00730 Thiamine metabolism SBML MML
lic00740 Riboflavin metabolism SBML MML
lic00750 Vitamin B6 metabolism SBML MML
lic00760 Nicotinate and nicotinamide metabolism SBML MML
lic00770 Pantothenate and CoA biosynthesis SBML MML
lic00780 Biotin metabolism SBML MML
lic00785 Lipoic acid metabolism SBML MML
lic00790 Folate biosynthesis SBML MML
lic00860 Porphyrin and chlorophyll metabolism SBML MML
lic00900 Terpenoid backbone biosynthesis SBML MML
lic00903 (Undocumented) SBML MML
lic00910 Nitrogen metabolism SBML MML
lic00920 Sulfur metabolism SBML MML
lic00930 Caprolactam degradation SBML MML
lic00960 (Undocumented) SBML MML
lic00970 Aminoacyl-tRNA biosynthesis SBML MML
lic00980 Metabolism of xenobiotics by cytochrome P450 SBML MML
lic00982 (Undocumented) SBML MML
lic00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.