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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism ljo: Lactobacillus johnsonii

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
ljo00010 Glycolysis / Gluconeogenesis SBML MML
ljo00020 Citrate cycle (TCA cycle) SBML MML
ljo00030 Pentose phosphate pathway SBML MML
ljo00040 Pentose and glucuronate interconversions SBML MML
ljo00051 Fructose and mannose metabolism SBML MML
ljo00052 Galactose metabolism SBML MML
ljo00061 Fatty acid biosynthesis SBML MML
ljo00071 Fatty acid metabolism SBML MML
ljo00072 Synthesis and degradation of ketone bodies SBML MML
ljo00100 (Undocumented) SBML MML
ljo00120 (Undocumented) SBML MML
ljo00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
ljo00220 (Undocumented) SBML MML
ljo00230 Purine metabolism SBML MML
ljo00240 Pyrimidine metabolism SBML MML
ljo00251 (Undocumented) SBML MML
ljo00252 (Undocumented) SBML MML
ljo00260 Glycine, serine and threonine metabolism SBML MML
ljo00271 (Undocumented) SBML MML
ljo00272 (Undocumented) SBML MML
ljo00280 Valine, leucine and isoleucine degradation SBML MML
ljo00290 Valine, leucine and isoleucine biosynthesis SBML MML
ljo00300 Lysine biosynthesis SBML MML
ljo00310 Lysine degradation SBML MML
ljo00330 Arginine and proline metabolism SBML MML
ljo00340 Histidine metabolism SBML MML
ljo00350 Tyrosine metabolism SBML MML
ljo00380 Tryptophan metabolism SBML MML
ljo00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
ljo00430 Taurine and hypotaurine metabolism SBML MML
ljo00450 Selenoamino acid metabolism SBML MML
ljo00460 (Undocumented) SBML MML
ljo00471 D-Glutamine and D-glutamate metabolism SBML MML
ljo00473 D-Alanine metabolism SBML MML
ljo00480 Glutathione metabolism SBML MML
ljo00500 Starch and sucrose metabolism SBML MML
ljo00520 Amino sugar and nucleotide sugar metabolism SBML MML
ljo00521 Streptomycin biosynthesis SBML MML
ljo00523 Polyketide sugar unit biosynthesis SBML MML
ljo00530 (Undocumented) SBML MML
ljo00550 Peptidoglycan biosynthesis SBML MML
ljo00561 Glycerolipid metabolism SBML MML
ljo00564 Glycerophospholipid metabolism SBML MML
ljo00600 Sphingolipid metabolism SBML MML
ljo00620 Pyruvate metabolism SBML MML
ljo00624 1- and 2-Methylnaphthalene degradation SBML MML
ljo00630 Glyoxylate and dicarboxylate metabolism SBML MML
ljo00632 (Undocumented) SBML MML
ljo00640 Propanoate metabolism SBML MML
ljo00641 3-Chloroacrylic acid degradation SBML MML
ljo00650 Butanoate metabolism SBML MML
ljo00660 C5-Branched dibasic acid metabolism SBML MML
ljo00670 One carbon pool by folate SBML MML
ljo00680 Methane metabolism SBML MML
ljo00710 (Undocumented) SBML MML
ljo00720 (Undocumented) SBML MML
ljo00730 Thiamine metabolism SBML MML
ljo00740 Riboflavin metabolism SBML MML
ljo00750 Vitamin B6 metabolism SBML MML
ljo00760 Nicotinate and nicotinamide metabolism SBML MML
ljo00770 Pantothenate and CoA biosynthesis SBML MML
ljo00790 Folate biosynthesis SBML MML
ljo00900 Terpenoid backbone biosynthesis SBML MML
ljo00910 Nitrogen metabolism SBML MML
ljo00960 (Undocumented) SBML MML
ljo00970 Aminoacyl-tRNA biosynthesis SBML MML
ljo00982 (Undocumented) SBML MML
ljo00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.