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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism llc: Lactococcus lactis subsp. cremoris SK11

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
llc00010 Glycolysis / Gluconeogenesis SBML MML
llc00020 Citrate cycle (TCA cycle) SBML MML
llc00030 Pentose phosphate pathway SBML MML
llc00040 Pentose and glucuronate interconversions SBML MML
llc00051 Fructose and mannose metabolism SBML MML
llc00052 Galactose metabolism SBML MML
llc00061 Fatty acid biosynthesis SBML MML
llc00071 Fatty acid metabolism SBML MML
llc00072 Synthesis and degradation of ketone bodies SBML MML
llc00100 (Undocumented) SBML MML
llc00120 (Undocumented) SBML MML
llc00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
llc00220 (Undocumented) SBML MML
llc00230 Purine metabolism SBML MML
llc00240 Pyrimidine metabolism SBML MML
llc00251 (Undocumented) SBML MML
llc00252 (Undocumented) SBML MML
llc00260 Glycine, serine and threonine metabolism SBML MML
llc00271 (Undocumented) SBML MML
llc00272 (Undocumented) SBML MML
llc00280 Valine, leucine and isoleucine degradation SBML MML
llc00290 Valine, leucine and isoleucine biosynthesis SBML MML
llc00300 Lysine biosynthesis SBML MML
llc00330 Arginine and proline metabolism SBML MML
llc00340 Histidine metabolism SBML MML
llc00350 Tyrosine metabolism SBML MML
llc00360 Phenylalanine metabolism SBML MML
llc00361 gamma-Hexachlorocyclohexane degradation SBML MML
llc00362 (Undocumented) SBML MML
llc00363 Bisphenol A degradation SBML MML
llc00380 Tryptophan metabolism SBML MML
llc00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
llc00401 Novobiocin biosynthesis SBML MML
llc00430 Taurine and hypotaurine metabolism SBML MML
llc00450 Selenoamino acid metabolism SBML MML
llc00460 (Undocumented) SBML MML
llc00471 D-Glutamine and D-glutamate metabolism SBML MML
llc00473 D-Alanine metabolism SBML MML
llc00480 Glutathione metabolism SBML MML
llc00500 Starch and sucrose metabolism SBML MML
llc00520 Amino sugar and nucleotide sugar metabolism SBML MML
llc00521 Streptomycin biosynthesis SBML MML
llc00523 Polyketide sugar unit biosynthesis SBML MML
llc00530 (Undocumented) SBML MML
llc00550 Peptidoglycan biosynthesis SBML MML
llc00561 Glycerolipid metabolism SBML MML
llc00562 Inositol phosphate metabolism SBML MML
llc00564 Glycerophospholipid metabolism SBML MML
llc00590 Arachidonic acid metabolism SBML MML
llc00620 Pyruvate metabolism SBML MML
llc00624 1- and 2-Methylnaphthalene degradation SBML MML
llc00626 Naphthalene and anthracene degradation SBML MML
llc00630 Glyoxylate and dicarboxylate metabolism SBML MML
llc00632 (Undocumented) SBML MML
llc00640 Propanoate metabolism SBML MML
llc00641 3-Chloroacrylic acid degradation SBML MML
llc00650 Butanoate metabolism SBML MML
llc00660 C5-Branched dibasic acid metabolism SBML MML
llc00670 One carbon pool by folate SBML MML
llc00680 Methane metabolism SBML MML
llc00710 (Undocumented) SBML MML
llc00720 (Undocumented) SBML MML
llc00730 Thiamine metabolism SBML MML
llc00740 Riboflavin metabolism SBML MML
llc00750 Vitamin B6 metabolism SBML MML
llc00760 Nicotinate and nicotinamide metabolism SBML MML
llc00770 Pantothenate and CoA biosynthesis SBML MML
llc00780 Biotin metabolism SBML MML
llc00785 Lipoic acid metabolism SBML MML
llc00790 Folate biosynthesis SBML MML
llc00860 Porphyrin and chlorophyll metabolism SBML MML
llc00900 Terpenoid backbone biosynthesis SBML MML
llc00903 (Undocumented) SBML MML
llc00910 Nitrogen metabolism SBML MML
llc00920 Sulfur metabolism SBML MML
llc00960 (Undocumented) SBML MML
llc00970 Aminoacyl-tRNA biosynthesis SBML MML
llc00982 (Undocumented) SBML MML
llc00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.