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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism lma: Leishmania major

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
lma00010 Glycolysis / Gluconeogenesis SBML MML
lma00020 Citrate cycle (TCA cycle) SBML MML
lma00030 Pentose phosphate pathway SBML MML
lma00040 Pentose and glucuronate interconversions SBML MML
lma00051 Fructose and mannose metabolism SBML MML
lma00052 Galactose metabolism SBML MML
lma00053 Ascorbate and aldarate metabolism SBML MML
lma00061 Fatty acid biosynthesis SBML MML
lma00062 Fatty acid elongation in mitochondria SBML MML
lma00071 Fatty acid metabolism SBML MML
lma00100 (Undocumented) SBML MML
lma00120 (Undocumented) SBML MML
lma00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
lma00150 Androgen and estrogen metabolism SBML MML
lma00220 (Undocumented) SBML MML
lma00230 Purine metabolism SBML MML
lma00240 Pyrimidine metabolism SBML MML
lma00251 (Undocumented) SBML MML
lma00252 (Undocumented) SBML MML
lma00260 Glycine, serine and threonine metabolism SBML MML
lma00271 (Undocumented) SBML MML
lma00272 (Undocumented) SBML MML
lma00280 Valine, leucine and isoleucine degradation SBML MML
lma00281 Geraniol degradation SBML MML
lma00290 Valine, leucine and isoleucine biosynthesis SBML MML
lma00300 Lysine biosynthesis SBML MML
lma00310 Lysine degradation SBML MML
lma00330 Arginine and proline metabolism SBML MML
lma00340 Histidine metabolism SBML MML
lma00350 Tyrosine metabolism SBML MML
lma00351 1,1,1-Trichloro-2,2-bis(4-chlorophenyl)ethane (DDT) degradation SBML MML
lma00360 Phenylalanine metabolism SBML MML
lma00361 gamma-Hexachlorocyclohexane degradation SBML MML
lma00362 (Undocumented) SBML MML
lma00380 Tryptophan metabolism SBML MML
lma00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
lma00401 Novobiocin biosynthesis SBML MML
lma00410 beta-Alanine metabolism SBML MML
lma00440 Phosphonate and phosphinate metabolism SBML MML
lma00450 Selenoamino acid metabolism SBML MML
lma00460 (Undocumented) SBML MML
lma00480 Glutathione metabolism SBML MML
lma00500 Starch and sucrose metabolism SBML MML
lma00510 (Undocumented) SBML MML
lma00520 Amino sugar and nucleotide sugar metabolism SBML MML
lma00521 Streptomycin biosynthesis SBML MML
lma00530 (Undocumented) SBML MML
lma00550 Peptidoglycan biosynthesis SBML MML
lma00561 Glycerolipid metabolism SBML MML
lma00562 Inositol phosphate metabolism SBML MML
lma00564 Glycerophospholipid metabolism SBML MML
lma00565 Ether lipid metabolism SBML MML
lma00590 Arachidonic acid metabolism SBML MML
lma00592 alpha-Linolenic acid metabolism SBML MML
lma00600 Sphingolipid metabolism SBML MML
lma00620 Pyruvate metabolism SBML MML
lma00624 1- and 2-Methylnaphthalene degradation SBML MML
lma00626 Naphthalene and anthracene degradation SBML MML
lma00628 Fluorene degradation SBML MML
lma00630 Glyoxylate and dicarboxylate metabolism SBML MML
lma00632 (Undocumented) SBML MML
lma00640 Propanoate metabolism SBML MML
lma00641 3-Chloroacrylic acid degradation SBML MML
lma00642 Ethylbenzene degradation SBML MML
lma00650 Butanoate metabolism SBML MML
lma00670 One carbon pool by folate SBML MML
lma00680 Methane metabolism SBML MML
lma00710 (Undocumented) SBML MML
lma00720 (Undocumented) SBML MML
lma00730 Thiamine metabolism SBML MML
lma00740 Riboflavin metabolism SBML MML
lma00750 Vitamin B6 metabolism SBML MML
lma00760 Nicotinate and nicotinamide metabolism SBML MML
lma00770 Pantothenate and CoA biosynthesis SBML MML
lma00780 Biotin metabolism SBML MML
lma00785 Lipoic acid metabolism SBML MML
lma00790 Folate biosynthesis SBML MML
lma00791 Atrazine degradation SBML MML
lma00860 Porphyrin and chlorophyll metabolism SBML MML
lma00900 Terpenoid backbone biosynthesis SBML MML
lma00903 (Undocumented) SBML MML
lma00910 Nitrogen metabolism SBML MML
lma00920 Sulfur metabolism SBML MML
lma00930 Caprolactam degradation SBML MML
lma00940 (Undocumented) SBML MML
lma00950 (Undocumented) SBML MML
lma00960 (Undocumented) SBML MML
lma00970 Aminoacyl-tRNA biosynthesis SBML MML
lma00982 (Undocumented) SBML MML
lma00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.