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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism lpf: Legionella pneumophila Lens

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
lpf00010 Glycolysis / Gluconeogenesis SBML MML
lpf00020 Citrate cycle (TCA cycle) SBML MML
lpf00030 Pentose phosphate pathway SBML MML
lpf00031 (Undocumented) SBML MML
lpf00040 Pentose and glucuronate interconversions SBML MML
lpf00051 Fructose and mannose metabolism SBML MML
lpf00052 Galactose metabolism SBML MML
lpf00061 Fatty acid biosynthesis SBML MML
lpf00062 Fatty acid elongation in mitochondria SBML MML
lpf00071 Fatty acid metabolism SBML MML
lpf00072 Synthesis and degradation of ketone bodies SBML MML
lpf00100 (Undocumented) SBML MML
lpf00120 (Undocumented) SBML MML
lpf00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
lpf00220 (Undocumented) SBML MML
lpf00230 Purine metabolism SBML MML
lpf00240 Pyrimidine metabolism SBML MML
lpf00251 (Undocumented) SBML MML
lpf00252 (Undocumented) SBML MML
lpf00260 Glycine, serine and threonine metabolism SBML MML
lpf00271 (Undocumented) SBML MML
lpf00272 (Undocumented) SBML MML
lpf00280 Valine, leucine and isoleucine degradation SBML MML
lpf00281 Geraniol degradation SBML MML
lpf00290 Valine, leucine and isoleucine biosynthesis SBML MML
lpf00300 Lysine biosynthesis SBML MML
lpf00310 Lysine degradation SBML MML
lpf00330 Arginine and proline metabolism SBML MML
lpf00340 Histidine metabolism SBML MML
lpf00350 Tyrosine metabolism SBML MML
lpf00360 Phenylalanine metabolism SBML MML
lpf00361 gamma-Hexachlorocyclohexane degradation SBML MML
lpf00362 (Undocumented) SBML MML
lpf00364 Fluorobenzoate degradation SBML MML
lpf00380 Tryptophan metabolism SBML MML
lpf00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
lpf00401 Novobiocin biosynthesis SBML MML
lpf00410 beta-Alanine metabolism SBML MML
lpf00430 Taurine and hypotaurine metabolism SBML MML
lpf00450 Selenoamino acid metabolism SBML MML
lpf00460 (Undocumented) SBML MML
lpf00471 D-Glutamine and D-glutamate metabolism SBML MML
lpf00472 D-Arginine and D-ornithine metabolism SBML MML
lpf00473 D-Alanine metabolism SBML MML
lpf00480 Glutathione metabolism SBML MML
lpf00500 Starch and sucrose metabolism SBML MML
lpf00520 Amino sugar and nucleotide sugar metabolism SBML MML
lpf00521 Streptomycin biosynthesis SBML MML
lpf00523 Polyketide sugar unit biosynthesis SBML MML
lpf00530 (Undocumented) SBML MML
lpf00540 Lipopolysaccharide biosynthesis SBML MML
lpf00550 Peptidoglycan biosynthesis SBML MML
lpf00561 Glycerolipid metabolism SBML MML
lpf00562 Inositol phosphate metabolism SBML MML
lpf00564 Glycerophospholipid metabolism SBML MML
lpf00592 alpha-Linolenic acid metabolism SBML MML
lpf00600 Sphingolipid metabolism SBML MML
lpf00620 Pyruvate metabolism SBML MML
lpf00622 Toluene and xylene degradation SBML MML
lpf00624 1- and 2-Methylnaphthalene degradation SBML MML
lpf00626 Naphthalene and anthracene degradation SBML MML
lpf00627 1,4-Dichlorobenzene degradation SBML MML
lpf00630 Glyoxylate and dicarboxylate metabolism SBML MML
lpf00632 (Undocumented) SBML MML
lpf00640 Propanoate metabolism SBML MML
lpf00641 3-Chloroacrylic acid degradation SBML MML
lpf00642 Ethylbenzene degradation SBML MML
lpf00643 Styrene degradation SBML MML
lpf00650 Butanoate metabolism SBML MML
lpf00670 One carbon pool by folate SBML MML
lpf00680 Methane metabolism SBML MML
lpf00710 (Undocumented) SBML MML
lpf00720 (Undocumented) SBML MML
lpf00730 Thiamine metabolism SBML MML
lpf00740 Riboflavin metabolism SBML MML
lpf00750 Vitamin B6 metabolism SBML MML
lpf00760 Nicotinate and nicotinamide metabolism SBML MML
lpf00770 Pantothenate and CoA biosynthesis SBML MML
lpf00780 Biotin metabolism SBML MML
lpf00785 Lipoic acid metabolism SBML MML
lpf00790 Folate biosynthesis SBML MML
lpf00860 Porphyrin and chlorophyll metabolism SBML MML
lpf00900 Terpenoid backbone biosynthesis SBML MML
lpf00903 (Undocumented) SBML MML
lpf00910 Nitrogen metabolism SBML MML
lpf00930 Caprolactam degradation SBML MML
lpf00970 Aminoacyl-tRNA biosynthesis SBML MML
lpf00980 Metabolism of xenobiotics by cytochrome P450 SBML MML
lpf00982 (Undocumented) SBML MML
lpf00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.