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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism lxx: Leifsonia xyli xyli CTCB07

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
lxx00010 Glycolysis / Gluconeogenesis SBML MML
lxx00020 Citrate cycle (TCA cycle) SBML MML
lxx00030 Pentose phosphate pathway SBML MML
lxx00031 (Undocumented) SBML MML
lxx00040 Pentose and glucuronate interconversions SBML MML
lxx00051 Fructose and mannose metabolism SBML MML
lxx00052 Galactose metabolism SBML MML
lxx00053 Ascorbate and aldarate metabolism SBML MML
lxx00061 Fatty acid biosynthesis SBML MML
lxx00062 Fatty acid elongation in mitochondria SBML MML
lxx00071 Fatty acid metabolism SBML MML
lxx00100 (Undocumented) SBML MML
lxx00120 (Undocumented) SBML MML
lxx00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
lxx00220 (Undocumented) SBML MML
lxx00230 Purine metabolism SBML MML
lxx00240 Pyrimidine metabolism SBML MML
lxx00251 (Undocumented) SBML MML
lxx00252 (Undocumented) SBML MML
lxx00260 Glycine, serine and threonine metabolism SBML MML
lxx00271 (Undocumented) SBML MML
lxx00272 (Undocumented) SBML MML
lxx00280 Valine, leucine and isoleucine degradation SBML MML
lxx00281 Geraniol degradation SBML MML
lxx00290 Valine, leucine and isoleucine biosynthesis SBML MML
lxx00300 Lysine biosynthesis SBML MML
lxx00310 Lysine degradation SBML MML
lxx00330 Arginine and proline metabolism SBML MML
lxx00340 Histidine metabolism SBML MML
lxx00350 Tyrosine metabolism SBML MML
lxx00360 Phenylalanine metabolism SBML MML
lxx00380 Tryptophan metabolism SBML MML
lxx00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
lxx00401 Novobiocin biosynthesis SBML MML
lxx00410 beta-Alanine metabolism SBML MML
lxx00430 Taurine and hypotaurine metabolism SBML MML
lxx00450 Selenoamino acid metabolism SBML MML
lxx00460 (Undocumented) SBML MML
lxx00471 D-Glutamine and D-glutamate metabolism SBML MML
lxx00473 D-Alanine metabolism SBML MML
lxx00480 Glutathione metabolism SBML MML
lxx00500 Starch and sucrose metabolism SBML MML
lxx00520 Amino sugar and nucleotide sugar metabolism SBML MML
lxx00521 Streptomycin biosynthesis SBML MML
lxx00523 Polyketide sugar unit biosynthesis SBML MML
lxx00530 (Undocumented) SBML MML
lxx00550 Peptidoglycan biosynthesis SBML MML
lxx00561 Glycerolipid metabolism SBML MML
lxx00562 Inositol phosphate metabolism SBML MML
lxx00564 Glycerophospholipid metabolism SBML MML
lxx00590 Arachidonic acid metabolism SBML MML
lxx00620 Pyruvate metabolism SBML MML
lxx00624 1- and 2-Methylnaphthalene degradation SBML MML
lxx00630 Glyoxylate and dicarboxylate metabolism SBML MML
lxx00632 (Undocumented) SBML MML
lxx00640 Propanoate metabolism SBML MML
lxx00641 3-Chloroacrylic acid degradation SBML MML
lxx00643 Styrene degradation SBML MML
lxx00650 Butanoate metabolism SBML MML
lxx00660 C5-Branched dibasic acid metabolism SBML MML
lxx00670 One carbon pool by folate SBML MML
lxx00680 Methane metabolism SBML MML
lxx00710 (Undocumented) SBML MML
lxx00720 (Undocumented) SBML MML
lxx00730 Thiamine metabolism SBML MML
lxx00740 Riboflavin metabolism SBML MML
lxx00750 Vitamin B6 metabolism SBML MML
lxx00760 Nicotinate and nicotinamide metabolism SBML MML
lxx00770 Pantothenate and CoA biosynthesis SBML MML
lxx00780 Biotin metabolism SBML MML
lxx00785 Lipoic acid metabolism SBML MML
lxx00790 Folate biosynthesis SBML MML
lxx00860 Porphyrin and chlorophyll metabolism SBML MML
lxx00900 Terpenoid backbone biosynthesis SBML MML
lxx00903 (Undocumented) SBML MML
lxx00910 Nitrogen metabolism SBML MML
lxx00920 Sulfur metabolism SBML MML
lxx00930 Caprolactam degradation SBML MML
lxx00970 Aminoacyl-tRNA biosynthesis SBML MML
lxx00982 (Undocumented) SBML MML
lxx00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.