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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism mmw: Marinomonas sp. MWYL1

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
mmw00010 Glycolysis / Gluconeogenesis SBML MML
mmw00020 Citrate cycle (TCA cycle) SBML MML
mmw00030 Pentose phosphate pathway SBML MML
mmw00031 (Undocumented) SBML MML
mmw00040 Pentose and glucuronate interconversions SBML MML
mmw00051 Fructose and mannose metabolism SBML MML
mmw00052 Galactose metabolism SBML MML
mmw00053 Ascorbate and aldarate metabolism SBML MML
mmw00061 Fatty acid biosynthesis SBML MML
mmw00062 Fatty acid elongation in mitochondria SBML MML
mmw00071 Fatty acid metabolism SBML MML
mmw00072 Synthesis and degradation of ketone bodies SBML MML
mmw00100 (Undocumented) SBML MML
mmw00120 (Undocumented) SBML MML
mmw00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
mmw00140 (Undocumented) SBML MML
mmw00150 Androgen and estrogen metabolism SBML MML
mmw00220 (Undocumented) SBML MML
mmw00230 Purine metabolism SBML MML
mmw00240 Pyrimidine metabolism SBML MML
mmw00251 (Undocumented) SBML MML
mmw00252 (Undocumented) SBML MML
mmw00260 Glycine, serine and threonine metabolism SBML MML
mmw00271 (Undocumented) SBML MML
mmw00272 (Undocumented) SBML MML
mmw00280 Valine, leucine and isoleucine degradation SBML MML
mmw00281 Geraniol degradation SBML MML
mmw00290 Valine, leucine and isoleucine biosynthesis SBML MML
mmw00300 Lysine biosynthesis SBML MML
mmw00310 Lysine degradation SBML MML
mmw00330 Arginine and proline metabolism SBML MML
mmw00340 Histidine metabolism SBML MML
mmw00350 Tyrosine metabolism SBML MML
mmw00360 Phenylalanine metabolism SBML MML
mmw00361 gamma-Hexachlorocyclohexane degradation SBML MML
mmw00362 (Undocumented) SBML MML
mmw00363 Bisphenol A degradation SBML MML
mmw00364 Fluorobenzoate degradation SBML MML
mmw00380 Tryptophan metabolism SBML MML
mmw00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
mmw00401 Novobiocin biosynthesis SBML MML
mmw00410 beta-Alanine metabolism SBML MML
mmw00430 Taurine and hypotaurine metabolism SBML MML
mmw00450 Selenoamino acid metabolism SBML MML
mmw00460 (Undocumented) SBML MML
mmw00471 D-Glutamine and D-glutamate metabolism SBML MML
mmw00473 D-Alanine metabolism SBML MML
mmw00480 Glutathione metabolism SBML MML
mmw00500 Starch and sucrose metabolism SBML MML
mmw00510 (Undocumented) SBML MML
mmw00520 Amino sugar and nucleotide sugar metabolism SBML MML
mmw00521 Streptomycin biosynthesis SBML MML
mmw00523 Polyketide sugar unit biosynthesis SBML MML
mmw00530 (Undocumented) SBML MML
mmw00540 Lipopolysaccharide biosynthesis SBML MML
mmw00550 Peptidoglycan biosynthesis SBML MML
mmw00561 Glycerolipid metabolism SBML MML
mmw00562 Inositol phosphate metabolism SBML MML
mmw00564 Glycerophospholipid metabolism SBML MML
mmw00590 Arachidonic acid metabolism SBML MML
mmw00592 alpha-Linolenic acid metabolism SBML MML
mmw00600 Sphingolipid metabolism SBML MML
mmw00620 Pyruvate metabolism SBML MML
mmw00622 Toluene and xylene degradation SBML MML
mmw00623 2,4-Dichlorobenzoate degradation SBML MML
mmw00624 1- and 2-Methylnaphthalene degradation SBML MML
mmw00626 Naphthalene and anthracene degradation SBML MML
mmw00627 1,4-Dichlorobenzene degradation SBML MML
mmw00628 Fluorene degradation SBML MML
mmw00629 Carbazole degradation SBML MML
mmw00630 Glyoxylate and dicarboxylate metabolism SBML MML
mmw00631 1,2-Dichloroethane degradation SBML MML
mmw00632 (Undocumented) SBML MML
mmw00633 Trinitrotoluene degradation SBML MML
mmw00640 Propanoate metabolism SBML MML
mmw00641 3-Chloroacrylic acid degradation SBML MML
mmw00642 Ethylbenzene degradation SBML MML
mmw00643 Styrene degradation SBML MML
mmw00650 Butanoate metabolism SBML MML
mmw00660 C5-Branched dibasic acid metabolism SBML MML
mmw00670 One carbon pool by folate SBML MML
mmw00680 Methane metabolism SBML MML
mmw00710 (Undocumented) SBML MML
mmw00720 (Undocumented) SBML MML
mmw00730 Thiamine metabolism SBML MML
mmw00740 Riboflavin metabolism SBML MML
mmw00750 Vitamin B6 metabolism SBML MML
mmw00760 Nicotinate and nicotinamide metabolism SBML MML
mmw00770 Pantothenate and CoA biosynthesis SBML MML
mmw00780 Biotin metabolism SBML MML
mmw00790 Folate biosynthesis SBML MML
mmw00791 Atrazine degradation SBML MML
mmw00860 Porphyrin and chlorophyll metabolism SBML MML
mmw00900 Terpenoid backbone biosynthesis SBML MML
mmw00903 (Undocumented) SBML MML
mmw00910 Nitrogen metabolism SBML MML
mmw00920 Sulfur metabolism SBML MML
mmw00930 Caprolactam degradation SBML MML
mmw00940 (Undocumented) SBML MML
mmw00950 (Undocumented) SBML MML
mmw00960 (Undocumented) SBML MML
mmw00970 Aminoacyl-tRNA biosynthesis SBML MML
mmw00980 Metabolism of xenobiotics by cytochrome P450 SBML MML
mmw00982 (Undocumented) SBML MML
mmw00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.