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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism mtp: Methanosaeta thermophila

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
mtp00010 Glycolysis / Gluconeogenesis SBML MML
mtp00020 Citrate cycle (TCA cycle) SBML MML
mtp00030 Pentose phosphate pathway SBML MML
mtp00040 Pentose and glucuronate interconversions SBML MML
mtp00051 Fructose and mannose metabolism SBML MML
mtp00052 Galactose metabolism SBML MML
mtp00071 Fatty acid metabolism SBML MML
mtp00100 (Undocumented) SBML MML
mtp00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
mtp00220 (Undocumented) SBML MML
mtp00230 Purine metabolism SBML MML
mtp00240 Pyrimidine metabolism SBML MML
mtp00251 (Undocumented) SBML MML
mtp00252 (Undocumented) SBML MML
mtp00260 Glycine, serine and threonine metabolism SBML MML
mtp00271 (Undocumented) SBML MML
mtp00272 (Undocumented) SBML MML
mtp00280 Valine, leucine and isoleucine degradation SBML MML
mtp00290 Valine, leucine and isoleucine biosynthesis SBML MML
mtp00300 Lysine biosynthesis SBML MML
mtp00330 Arginine and proline metabolism SBML MML
mtp00340 Histidine metabolism SBML MML
mtp00350 Tyrosine metabolism SBML MML
mtp00360 Phenylalanine metabolism SBML MML
mtp00380 Tryptophan metabolism SBML MML
mtp00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
mtp00450 Selenoamino acid metabolism SBML MML
mtp00500 Starch and sucrose metabolism SBML MML
mtp00510 (Undocumented) SBML MML
mtp00520 Amino sugar and nucleotide sugar metabolism SBML MML
mtp00521 Streptomycin biosynthesis SBML MML
mtp00523 Polyketide sugar unit biosynthesis SBML MML
mtp00530 (Undocumented) SBML MML
mtp00550 Peptidoglycan biosynthesis SBML MML
mtp00562 Inositol phosphate metabolism SBML MML
mtp00564 Glycerophospholipid metabolism SBML MML
mtp00620 Pyruvate metabolism SBML MML
mtp00630 Glyoxylate and dicarboxylate metabolism SBML MML
mtp00640 Propanoate metabolism SBML MML
mtp00650 Butanoate metabolism SBML MML
mtp00660 C5-Branched dibasic acid metabolism SBML MML
mtp00670 One carbon pool by folate SBML MML
mtp00680 Methane metabolism SBML MML
mtp00710 (Undocumented) SBML MML
mtp00720 (Undocumented) SBML MML
mtp00740 Riboflavin metabolism SBML MML
mtp00760 Nicotinate and nicotinamide metabolism SBML MML
mtp00770 Pantothenate and CoA biosynthesis SBML MML
mtp00780 Biotin metabolism SBML MML
mtp00790 Folate biosynthesis SBML MML
mtp00860 Porphyrin and chlorophyll metabolism SBML MML
mtp00900 Terpenoid backbone biosynthesis SBML MML
mtp00910 Nitrogen metabolism SBML MML
mtp00940 (Undocumented) SBML MML
mtp00970 Aminoacyl-tRNA biosynthesis SBML MML
mtp00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.