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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism mtu: Mycobacterium tuberculosis H37Rv

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
mtu00010 Glycolysis / Gluconeogenesis SBML MML
mtu00020 Citrate cycle (TCA cycle) SBML MML
mtu00030 Pentose phosphate pathway SBML MML
mtu00031 (Undocumented) SBML MML
mtu00040 Pentose and glucuronate interconversions SBML MML
mtu00051 Fructose and mannose metabolism SBML MML
mtu00052 Galactose metabolism SBML MML
mtu00053 Ascorbate and aldarate metabolism SBML MML
mtu00061 Fatty acid biosynthesis SBML MML
mtu00062 Fatty acid elongation in mitochondria SBML MML
mtu00071 Fatty acid metabolism SBML MML
mtu00072 Synthesis and degradation of ketone bodies SBML MML
mtu00100 (Undocumented) SBML MML
mtu00120 (Undocumented) SBML MML
mtu00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
mtu00150 Androgen and estrogen metabolism SBML MML
mtu00220 (Undocumented) SBML MML
mtu00230 Purine metabolism SBML MML
mtu00240 Pyrimidine metabolism SBML MML
mtu00251 (Undocumented) SBML MML
mtu00252 (Undocumented) SBML MML
mtu00260 Glycine, serine and threonine metabolism SBML MML
mtu00271 (Undocumented) SBML MML
mtu00272 (Undocumented) SBML MML
mtu00280 Valine, leucine and isoleucine degradation SBML MML
mtu00281 Geraniol degradation SBML MML
mtu00290 Valine, leucine and isoleucine biosynthesis SBML MML
mtu00300 Lysine biosynthesis SBML MML
mtu00310 Lysine degradation SBML MML
mtu00311 Penicillin and cephalosporin biosynthesis SBML MML
mtu00330 Arginine and proline metabolism SBML MML
mtu00340 Histidine metabolism SBML MML
mtu00350 Tyrosine metabolism SBML MML
mtu00351 1,1,1-Trichloro-2,2-bis(4-chlorophenyl)ethane (DDT) degradation SBML MML
mtu00360 Phenylalanine metabolism SBML MML
mtu00361 gamma-Hexachlorocyclohexane degradation SBML MML
mtu00362 (Undocumented) SBML MML
mtu00363 Bisphenol A degradation SBML MML
mtu00364 Fluorobenzoate degradation SBML MML
mtu00380 Tryptophan metabolism SBML MML
mtu00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
mtu00401 Novobiocin biosynthesis SBML MML
mtu00410 beta-Alanine metabolism SBML MML
mtu00430 Taurine and hypotaurine metabolism SBML MML
mtu00450 Selenoamino acid metabolism SBML MML
mtu00460 (Undocumented) SBML MML
mtu00471 D-Glutamine and D-glutamate metabolism SBML MML
mtu00472 D-Arginine and D-ornithine metabolism SBML MML
mtu00473 D-Alanine metabolism SBML MML
mtu00480 Glutathione metabolism SBML MML
mtu00500 Starch and sucrose metabolism SBML MML
mtu00510 (Undocumented) SBML MML
mtu00520 Amino sugar and nucleotide sugar metabolism SBML MML
mtu00521 Streptomycin biosynthesis SBML MML
mtu00523 Polyketide sugar unit biosynthesis SBML MML
mtu00530 (Undocumented) SBML MML
mtu00540 Lipopolysaccharide biosynthesis SBML MML
mtu00550 Peptidoglycan biosynthesis SBML MML
mtu00561 Glycerolipid metabolism SBML MML
mtu00562 Inositol phosphate metabolism SBML MML
mtu00564 Glycerophospholipid metabolism SBML MML
mtu00565 Ether lipid metabolism SBML MML
mtu00591 Linoleic acid metabolism SBML MML
mtu00592 alpha-Linolenic acid metabolism SBML MML
mtu00620 Pyruvate metabolism SBML MML
mtu00621 (Undocumented) SBML MML
mtu00622 Toluene and xylene degradation SBML MML
mtu00624 1- and 2-Methylnaphthalene degradation SBML MML
mtu00626 Naphthalene and anthracene degradation SBML MML
mtu00627 1,4-Dichlorobenzene degradation SBML MML
mtu00628 Fluorene degradation SBML MML
mtu00629 Carbazole degradation SBML MML
mtu00630 Glyoxylate and dicarboxylate metabolism SBML MML
mtu00631 1,2-Dichloroethane degradation SBML MML
mtu00632 (Undocumented) SBML MML
mtu00640 Propanoate metabolism SBML MML
mtu00641 3-Chloroacrylic acid degradation SBML MML
mtu00642 Ethylbenzene degradation SBML MML
mtu00643 Styrene degradation SBML MML
mtu00650 Butanoate metabolism SBML MML
mtu00660 C5-Branched dibasic acid metabolism SBML MML
mtu00670 One carbon pool by folate SBML MML
mtu00680 Methane metabolism SBML MML
mtu00710 (Undocumented) SBML MML
mtu00720 (Undocumented) SBML MML
mtu00730 Thiamine metabolism SBML MML
mtu00740 Riboflavin metabolism SBML MML
mtu00750 Vitamin B6 metabolism SBML MML
mtu00760 Nicotinate and nicotinamide metabolism SBML MML
mtu00770 Pantothenate and CoA biosynthesis SBML MML
mtu00780 Biotin metabolism SBML MML
mtu00785 Lipoic acid metabolism SBML MML
mtu00790 Folate biosynthesis SBML MML
mtu00791 Atrazine degradation SBML MML
mtu00860 Porphyrin and chlorophyll metabolism SBML MML
mtu00900 Terpenoid backbone biosynthesis SBML MML
mtu00903 (Undocumented) SBML MML
mtu00910 Nitrogen metabolism SBML MML
mtu00920 Sulfur metabolism SBML MML
mtu00930 Caprolactam degradation SBML MML
mtu00940 (Undocumented) SBML MML
mtu00941 (Undocumented) SBML MML
mtu00950 (Undocumented) SBML MML
mtu00960 (Undocumented) SBML MML
mtu00970 Aminoacyl-tRNA biosynthesis SBML MML
mtu00982 (Undocumented) SBML MML
mtu00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.