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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism nse: Neorickettsia sennetsu

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
nse00010 Glycolysis / Gluconeogenesis SBML MML
nse00020 Citrate cycle (TCA cycle) SBML MML
nse00030 Pentose phosphate pathway SBML MML
nse00051 Fructose and mannose metabolism SBML MML
nse00061 Fatty acid biosynthesis SBML MML
nse00100 (Undocumented) SBML MML
nse00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
nse00230 Purine metabolism SBML MML
nse00240 Pyrimidine metabolism SBML MML
nse00251 (Undocumented) SBML MML
nse00252 (Undocumented) SBML MML
nse00260 Glycine, serine and threonine metabolism SBML MML
nse00271 (Undocumented) SBML MML
nse00272 (Undocumented) SBML MML
nse00280 Valine, leucine and isoleucine degradation SBML MML
nse00290 Valine, leucine and isoleucine biosynthesis SBML MML
nse00300 Lysine biosynthesis SBML MML
nse00310 Lysine degradation SBML MML
nse00330 Arginine and proline metabolism SBML MML
nse00340 Histidine metabolism SBML MML
nse00350 Tyrosine metabolism SBML MML
nse00380 Tryptophan metabolism SBML MML
nse00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
nse00450 Selenoamino acid metabolism SBML MML
nse00480 Glutathione metabolism SBML MML
nse00550 Peptidoglycan biosynthesis SBML MML
nse00561 Glycerolipid metabolism SBML MML
nse00564 Glycerophospholipid metabolism SBML MML
nse00620 Pyruvate metabolism SBML MML
nse00630 Glyoxylate and dicarboxylate metabolism SBML MML
nse00640 Propanoate metabolism SBML MML
nse00650 Butanoate metabolism SBML MML
nse00670 One carbon pool by folate SBML MML
nse00710 (Undocumented) SBML MML
nse00720 (Undocumented) SBML MML
nse00730 Thiamine metabolism SBML MML
nse00740 Riboflavin metabolism SBML MML
nse00750 Vitamin B6 metabolism SBML MML
nse00760 Nicotinate and nicotinamide metabolism SBML MML
nse00770 Pantothenate and CoA biosynthesis SBML MML
nse00780 Biotin metabolism SBML MML
nse00785 Lipoic acid metabolism SBML MML
nse00790 Folate biosynthesis SBML MML
nse00860 Porphyrin and chlorophyll metabolism SBML MML
nse00900 Terpenoid backbone biosynthesis SBML MML
nse00910 Nitrogen metabolism SBML MML
nse00970 Aminoacyl-tRNA biosynthesis SBML MML
nse00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.