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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism oaa: Ornithorhynchus anatinus (platypus)

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
oaa00010 Glycolysis / Gluconeogenesis SBML MML
oaa00020 Citrate cycle (TCA cycle) SBML MML
oaa00030 Pentose phosphate pathway SBML MML
oaa00040 Pentose and glucuronate interconversions SBML MML
oaa00051 Fructose and mannose metabolism SBML MML
oaa00052 Galactose metabolism SBML MML
oaa00053 Ascorbate and aldarate metabolism SBML MML
oaa00061 Fatty acid biosynthesis SBML MML
oaa00062 Fatty acid elongation in mitochondria SBML MML
oaa00071 Fatty acid metabolism SBML MML
oaa00072 Synthesis and degradation of ketone bodies SBML MML
oaa00100 (Undocumented) SBML MML
oaa00120 (Undocumented) SBML MML
oaa00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
oaa00140 (Undocumented) SBML MML
oaa00150 Androgen and estrogen metabolism SBML MML
oaa00220 (Undocumented) SBML MML
oaa00230 Purine metabolism SBML MML
oaa00232 Caffeine metabolism SBML MML
oaa00240 Pyrimidine metabolism SBML MML
oaa00251 (Undocumented) SBML MML
oaa00252 (Undocumented) SBML MML
oaa00260 Glycine, serine and threonine metabolism SBML MML
oaa00271 (Undocumented) SBML MML
oaa00272 (Undocumented) SBML MML
oaa00280 Valine, leucine and isoleucine degradation SBML MML
oaa00281 Geraniol degradation SBML MML
oaa00290 Valine, leucine and isoleucine biosynthesis SBML MML
oaa00300 Lysine biosynthesis SBML MML
oaa00310 Lysine degradation SBML MML
oaa00330 Arginine and proline metabolism SBML MML
oaa00340 Histidine metabolism SBML MML
oaa00350 Tyrosine metabolism SBML MML
oaa00360 Phenylalanine metabolism SBML MML
oaa00361 gamma-Hexachlorocyclohexane degradation SBML MML
oaa00363 Bisphenol A degradation SBML MML
oaa00364 Fluorobenzoate degradation SBML MML
oaa00380 Tryptophan metabolism SBML MML
oaa00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
oaa00401 Novobiocin biosynthesis SBML MML
oaa00410 beta-Alanine metabolism SBML MML
oaa00430 Taurine and hypotaurine metabolism SBML MML
oaa00440 Phosphonate and phosphinate metabolism SBML MML
oaa00450 Selenoamino acid metabolism SBML MML
oaa00460 (Undocumented) SBML MML
oaa00471 D-Glutamine and D-glutamate metabolism SBML MML
oaa00472 D-Arginine and D-ornithine metabolism SBML MML
oaa00480 Glutathione metabolism SBML MML
oaa00500 Starch and sucrose metabolism SBML MML
oaa00510 (Undocumented) SBML MML
oaa00520 Amino sugar and nucleotide sugar metabolism SBML MML
oaa00521 Streptomycin biosynthesis SBML MML
oaa00530 (Undocumented) SBML MML
oaa00550 Peptidoglycan biosynthesis SBML MML
oaa00561 Glycerolipid metabolism SBML MML
oaa00562 Inositol phosphate metabolism SBML MML
oaa00564 Glycerophospholipid metabolism SBML MML
oaa00565 Ether lipid metabolism SBML MML
oaa00590 Arachidonic acid metabolism SBML MML
oaa00591 Linoleic acid metabolism SBML MML
oaa00592 alpha-Linolenic acid metabolism SBML MML
oaa00600 Sphingolipid metabolism SBML MML
oaa00620 Pyruvate metabolism SBML MML
oaa00624 1- and 2-Methylnaphthalene degradation SBML MML
oaa00625 (Undocumented) SBML MML
oaa00626 Naphthalene and anthracene degradation SBML MML
oaa00627 1,4-Dichlorobenzene degradation SBML MML
oaa00630 Glyoxylate and dicarboxylate metabolism SBML MML
oaa00632 (Undocumented) SBML MML
oaa00640 Propanoate metabolism SBML MML
oaa00641 3-Chloroacrylic acid degradation SBML MML
oaa00643 Styrene degradation SBML MML
oaa00650 Butanoate metabolism SBML MML
oaa00660 C5-Branched dibasic acid metabolism SBML MML
oaa00670 One carbon pool by folate SBML MML
oaa00680 Methane metabolism SBML MML
oaa00710 (Undocumented) SBML MML
oaa00720 (Undocumented) SBML MML
oaa00730 Thiamine metabolism SBML MML
oaa00740 Riboflavin metabolism SBML MML
oaa00750 Vitamin B6 metabolism SBML MML
oaa00760 Nicotinate and nicotinamide metabolism SBML MML
oaa00770 Pantothenate and CoA biosynthesis SBML MML
oaa00780 Biotin metabolism SBML MML
oaa00790 Folate biosynthesis SBML MML
oaa00791 Atrazine degradation SBML MML
oaa00830 Retinol metabolism SBML MML
oaa00860 Porphyrin and chlorophyll metabolism SBML MML
oaa00900 Terpenoid backbone biosynthesis SBML MML
oaa00903 (Undocumented) SBML MML
oaa00910 Nitrogen metabolism SBML MML
oaa00920 Sulfur metabolism SBML MML
oaa00930 Caprolactam degradation SBML MML
oaa00940 (Undocumented) SBML MML
oaa00950 (Undocumented) SBML MML
oaa00960 (Undocumented) SBML MML
oaa00970 Aminoacyl-tRNA biosynthesis SBML MML
oaa00980 Metabolism of xenobiotics by cytochrome P450 SBML MML
oaa00982 (Undocumented) SBML MML
oaa00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.