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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism pto: Picrophilus torridus

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
pto00010 Glycolysis / Gluconeogenesis SBML MML
pto00020 Citrate cycle (TCA cycle) SBML MML
pto00030 Pentose phosphate pathway SBML MML
pto00040 Pentose and glucuronate interconversions SBML MML
pto00051 Fructose and mannose metabolism SBML MML
pto00052 Galactose metabolism SBML MML
pto00053 Ascorbate and aldarate metabolism SBML MML
pto00061 Fatty acid biosynthesis SBML MML
pto00071 Fatty acid metabolism SBML MML
pto00100 (Undocumented) SBML MML
pto00120 (Undocumented) SBML MML
pto00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
pto00220 (Undocumented) SBML MML
pto00230 Purine metabolism SBML MML
pto00240 Pyrimidine metabolism SBML MML
pto00251 (Undocumented) SBML MML
pto00252 (Undocumented) SBML MML
pto00260 Glycine, serine and threonine metabolism SBML MML
pto00271 (Undocumented) SBML MML
pto00272 (Undocumented) SBML MML
pto00280 Valine, leucine and isoleucine degradation SBML MML
pto00281 Geraniol degradation SBML MML
pto00290 Valine, leucine and isoleucine biosynthesis SBML MML
pto00300 Lysine biosynthesis SBML MML
pto00310 Lysine degradation SBML MML
pto00330 Arginine and proline metabolism SBML MML
pto00340 Histidine metabolism SBML MML
pto00350 Tyrosine metabolism SBML MML
pto00360 Phenylalanine metabolism SBML MML
pto00361 gamma-Hexachlorocyclohexane degradation SBML MML
pto00364 Fluorobenzoate degradation SBML MML
pto00380 Tryptophan metabolism SBML MML
pto00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
pto00401 Novobiocin biosynthesis SBML MML
pto00410 beta-Alanine metabolism SBML MML
pto00450 Selenoamino acid metabolism SBML MML
pto00460 (Undocumented) SBML MML
pto00480 Glutathione metabolism SBML MML
pto00500 Starch and sucrose metabolism SBML MML
pto00510 (Undocumented) SBML MML
pto00520 Amino sugar and nucleotide sugar metabolism SBML MML
pto00521 Streptomycin biosynthesis SBML MML
pto00523 Polyketide sugar unit biosynthesis SBML MML
pto00530 (Undocumented) SBML MML
pto00550 Peptidoglycan biosynthesis SBML MML
pto00561 Glycerolipid metabolism SBML MML
pto00564 Glycerophospholipid metabolism SBML MML
pto00592 alpha-Linolenic acid metabolism SBML MML
pto00620 Pyruvate metabolism SBML MML
pto00624 1- and 2-Methylnaphthalene degradation SBML MML
pto00627 1,4-Dichlorobenzene degradation SBML MML
pto00630 Glyoxylate and dicarboxylate metabolism SBML MML
pto00632 (Undocumented) SBML MML
pto00640 Propanoate metabolism SBML MML
pto00641 3-Chloroacrylic acid degradation SBML MML
pto00642 Ethylbenzene degradation SBML MML
pto00643 Styrene degradation SBML MML
pto00650 Butanoate metabolism SBML MML
pto00660 C5-Branched dibasic acid metabolism SBML MML
pto00670 One carbon pool by folate SBML MML
pto00680 Methane metabolism SBML MML
pto00710 (Undocumented) SBML MML
pto00720 (Undocumented) SBML MML
pto00730 Thiamine metabolism SBML MML
pto00740 Riboflavin metabolism SBML MML
pto00750 Vitamin B6 metabolism SBML MML
pto00760 Nicotinate and nicotinamide metabolism SBML MML
pto00770 Pantothenate and CoA biosynthesis SBML MML
pto00785 Lipoic acid metabolism SBML MML
pto00790 Folate biosynthesis SBML MML
pto00860 Porphyrin and chlorophyll metabolism SBML MML
pto00900 Terpenoid backbone biosynthesis SBML MML
pto00903 (Undocumented) SBML MML
pto00906 Carotenoid biosynthesis SBML MML
pto00910 Nitrogen metabolism SBML MML
pto00920 Sulfur metabolism SBML MML
pto00930 Caprolactam degradation SBML MML
pto00950 (Undocumented) SBML MML
pto00960 (Undocumented) SBML MML
pto00970 Aminoacyl-tRNA biosynthesis SBML MML
pto00982 (Undocumented) SBML MML
pto00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.