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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism rco: Rickettsia conorii

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
rco00010 Glycolysis / Gluconeogenesis SBML MML
rco00020 Citrate cycle (TCA cycle) SBML MML
rco00051 Fructose and mannose metabolism SBML MML
rco00061 Fatty acid biosynthesis SBML MML
rco00062 Fatty acid elongation in mitochondria SBML MML
rco00071 Fatty acid metabolism SBML MML
rco00072 Synthesis and degradation of ketone bodies SBML MML
rco00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
rco00230 Purine metabolism SBML MML
rco00240 Pyrimidine metabolism SBML MML
rco00251 (Undocumented) SBML MML
rco00252 (Undocumented) SBML MML
rco00260 Glycine, serine and threonine metabolism SBML MML
rco00271 (Undocumented) SBML MML
rco00272 (Undocumented) SBML MML
rco00280 Valine, leucine and isoleucine degradation SBML MML
rco00281 Geraniol degradation SBML MML
rco00290 Valine, leucine and isoleucine biosynthesis SBML MML
rco00300 Lysine biosynthesis SBML MML
rco00310 Lysine degradation SBML MML
rco00330 Arginine and proline metabolism SBML MML
rco00340 Histidine metabolism SBML MML
rco00350 Tyrosine metabolism SBML MML
rco00362 (Undocumented) SBML MML
rco00380 Tryptophan metabolism SBML MML
rco00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
rco00430 Taurine and hypotaurine metabolism SBML MML
rco00450 Selenoamino acid metabolism SBML MML
rco00460 (Undocumented) SBML MML
rco00471 D-Glutamine and D-glutamate metabolism SBML MML
rco00473 D-Alanine metabolism SBML MML
rco00480 Glutathione metabolism SBML MML
rco00500 Starch and sucrose metabolism SBML MML
rco00520 Amino sugar and nucleotide sugar metabolism SBML MML
rco00530 (Undocumented) SBML MML
rco00540 Lipopolysaccharide biosynthesis SBML MML
rco00550 Peptidoglycan biosynthesis SBML MML
rco00561 Glycerolipid metabolism SBML MML
rco00564 Glycerophospholipid metabolism SBML MML
rco00620 Pyruvate metabolism SBML MML
rco00630 Glyoxylate and dicarboxylate metabolism SBML MML
rco00632 (Undocumented) SBML MML
rco00640 Propanoate metabolism SBML MML
rco00650 Butanoate metabolism SBML MML
rco00670 One carbon pool by folate SBML MML
rco00710 (Undocumented) SBML MML
rco00720 (Undocumented) SBML MML
rco00760 Nicotinate and nicotinamide metabolism SBML MML
rco00770 Pantothenate and CoA biosynthesis SBML MML
rco00780 Biotin metabolism SBML MML
rco00785 Lipoic acid metabolism SBML MML
rco00790 Folate biosynthesis SBML MML
rco00860 Porphyrin and chlorophyll metabolism SBML MML
rco00900 Terpenoid backbone biosynthesis SBML MML
rco00903 (Undocumented) SBML MML
rco00930 Caprolactam degradation SBML MML
rco00970 Aminoacyl-tRNA biosynthesis SBML MML
rco00980 Metabolism of xenobiotics by cytochrome P450 SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.