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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism rfe: Rickettsia felis

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
rfe00010 Glycolysis / Gluconeogenesis SBML MML
rfe00020 Citrate cycle (TCA cycle) SBML MML
rfe00030 Pentose phosphate pathway SBML MML
rfe00051 Fructose and mannose metabolism SBML MML
rfe00061 Fatty acid biosynthesis SBML MML
rfe00062 Fatty acid elongation in mitochondria SBML MML
rfe00071 Fatty acid metabolism SBML MML
rfe00072 Synthesis and degradation of ketone bodies SBML MML
rfe00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
rfe00230 Purine metabolism SBML MML
rfe00240 Pyrimidine metabolism SBML MML
rfe00251 (Undocumented) SBML MML
rfe00252 (Undocumented) SBML MML
rfe00260 Glycine, serine and threonine metabolism SBML MML
rfe00271 (Undocumented) SBML MML
rfe00272 (Undocumented) SBML MML
rfe00280 Valine, leucine and isoleucine degradation SBML MML
rfe00281 Geraniol degradation SBML MML
rfe00290 Valine, leucine and isoleucine biosynthesis SBML MML
rfe00300 Lysine biosynthesis SBML MML
rfe00310 Lysine degradation SBML MML
rfe00311 Penicillin and cephalosporin biosynthesis SBML MML
rfe00330 Arginine and proline metabolism SBML MML
rfe00340 Histidine metabolism SBML MML
rfe00350 Tyrosine metabolism SBML MML
rfe00360 Phenylalanine metabolism SBML MML
rfe00362 (Undocumented) SBML MML
rfe00380 Tryptophan metabolism SBML MML
rfe00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
rfe00430 Taurine and hypotaurine metabolism SBML MML
rfe00450 Selenoamino acid metabolism SBML MML
rfe00460 (Undocumented) SBML MML
rfe00471 D-Glutamine and D-glutamate metabolism SBML MML
rfe00473 D-Alanine metabolism SBML MML
rfe00500 Starch and sucrose metabolism SBML MML
rfe00520 Amino sugar and nucleotide sugar metabolism SBML MML
rfe00521 Streptomycin biosynthesis SBML MML
rfe00530 (Undocumented) SBML MML
rfe00540 Lipopolysaccharide biosynthesis SBML MML
rfe00550 Peptidoglycan biosynthesis SBML MML
rfe00561 Glycerolipid metabolism SBML MML
rfe00562 Inositol phosphate metabolism SBML MML
rfe00564 Glycerophospholipid metabolism SBML MML
rfe00620 Pyruvate metabolism SBML MML
rfe00624 1- and 2-Methylnaphthalene degradation SBML MML
rfe00630 Glyoxylate and dicarboxylate metabolism SBML MML
rfe00632 (Undocumented) SBML MML
rfe00640 Propanoate metabolism SBML MML
rfe00650 Butanoate metabolism SBML MML
rfe00670 One carbon pool by folate SBML MML
rfe00710 (Undocumented) SBML MML
rfe00720 (Undocumented) SBML MML
rfe00760 Nicotinate and nicotinamide metabolism SBML MML
rfe00770 Pantothenate and CoA biosynthesis SBML MML
rfe00780 Biotin metabolism SBML MML
rfe00785 Lipoic acid metabolism SBML MML
rfe00790 Folate biosynthesis SBML MML
rfe00860 Porphyrin and chlorophyll metabolism SBML MML
rfe00900 Terpenoid backbone biosynthesis SBML MML
rfe00903 (Undocumented) SBML MML
rfe00930 Caprolactam degradation SBML MML
rfe00960 (Undocumented) SBML MML
rfe00970 Aminoacyl-tRNA biosynthesis SBML MML
rfe00980 Metabolism of xenobiotics by cytochrome P450 SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.