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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism rpr: Rickettsia prowazekii

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
rpr00010 Glycolysis / Gluconeogenesis SBML MML
rpr00020 Citrate cycle (TCA cycle) SBML MML
rpr00061 Fatty acid biosynthesis SBML MML
rpr00062 Fatty acid elongation in mitochondria SBML MML
rpr00071 Fatty acid metabolism SBML MML
rpr00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
rpr00230 Purine metabolism SBML MML
rpr00240 Pyrimidine metabolism SBML MML
rpr00251 (Undocumented) SBML MML
rpr00252 (Undocumented) SBML MML
rpr00260 Glycine, serine and threonine metabolism SBML MML
rpr00271 (Undocumented) SBML MML
rpr00272 (Undocumented) SBML MML
rpr00280 Valine, leucine and isoleucine degradation SBML MML
rpr00281 Geraniol degradation SBML MML
rpr00290 Valine, leucine and isoleucine biosynthesis SBML MML
rpr00300 Lysine biosynthesis SBML MML
rpr00310 Lysine degradation SBML MML
rpr00330 Arginine and proline metabolism SBML MML
rpr00340 Histidine metabolism SBML MML
rpr00350 Tyrosine metabolism SBML MML
rpr00380 Tryptophan metabolism SBML MML
rpr00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
rpr00430 Taurine and hypotaurine metabolism SBML MML
rpr00450 Selenoamino acid metabolism SBML MML
rpr00460 (Undocumented) SBML MML
rpr00471 D-Glutamine and D-glutamate metabolism SBML MML
rpr00473 D-Alanine metabolism SBML MML
rpr00500 Starch and sucrose metabolism SBML MML
rpr00530 (Undocumented) SBML MML
rpr00540 Lipopolysaccharide biosynthesis SBML MML
rpr00550 Peptidoglycan biosynthesis SBML MML
rpr00564 Glycerophospholipid metabolism SBML MML
rpr00620 Pyruvate metabolism SBML MML
rpr00630 Glyoxylate and dicarboxylate metabolism SBML MML
rpr00632 (Undocumented) SBML MML
rpr00640 Propanoate metabolism SBML MML
rpr00650 Butanoate metabolism SBML MML
rpr00670 One carbon pool by folate SBML MML
rpr00710 (Undocumented) SBML MML
rpr00720 (Undocumented) SBML MML
rpr00760 Nicotinate and nicotinamide metabolism SBML MML
rpr00770 Pantothenate and CoA biosynthesis SBML MML
rpr00785 Lipoic acid metabolism SBML MML
rpr00790 Folate biosynthesis SBML MML
rpr00860 Porphyrin and chlorophyll metabolism SBML MML
rpr00900 Terpenoid backbone biosynthesis SBML MML
rpr00903 (Undocumented) SBML MML
rpr00930 Caprolactam degradation SBML MML
rpr00970 Aminoacyl-tRNA biosynthesis SBML MML
rpr00980 Metabolism of xenobiotics by cytochrome P450 SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.