This page will look better in a graphical browser that supports web standards, but is accessible to any browser or internet device.

Served by Samwise.

Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism rso: Ralstonia solanacearum

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
rso00010 Glycolysis / Gluconeogenesis SBML MML
rso00020 Citrate cycle (TCA cycle) SBML MML
rso00030 Pentose phosphate pathway SBML MML
rso00031 (Undocumented) SBML MML
rso00040 Pentose and glucuronate interconversions SBML MML
rso00051 Fructose and mannose metabolism SBML MML
rso00052 Galactose metabolism SBML MML
rso00053 Ascorbate and aldarate metabolism SBML MML
rso00061 Fatty acid biosynthesis SBML MML
rso00062 Fatty acid elongation in mitochondria SBML MML
rso00071 Fatty acid metabolism SBML MML
rso00072 Synthesis and degradation of ketone bodies SBML MML
rso00100 (Undocumented) SBML MML
rso00120 (Undocumented) SBML MML
rso00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
rso00140 (Undocumented) SBML MML
rso00150 Androgen and estrogen metabolism SBML MML
rso00220 (Undocumented) SBML MML
rso00230 Purine metabolism SBML MML
rso00240 Pyrimidine metabolism SBML MML
rso00251 (Undocumented) SBML MML
rso00252 (Undocumented) SBML MML
rso00260 Glycine, serine and threonine metabolism SBML MML
rso00271 (Undocumented) SBML MML
rso00272 (Undocumented) SBML MML
rso00280 Valine, leucine and isoleucine degradation SBML MML
rso00281 Geraniol degradation SBML MML
rso00290 Valine, leucine and isoleucine biosynthesis SBML MML
rso00300 Lysine biosynthesis SBML MML
rso00310 Lysine degradation SBML MML
rso00311 Penicillin and cephalosporin biosynthesis SBML MML
rso00330 Arginine and proline metabolism SBML MML
rso00340 Histidine metabolism SBML MML
rso00350 Tyrosine metabolism SBML MML
rso00351 1,1,1-Trichloro-2,2-bis(4-chlorophenyl)ethane (DDT) degradation SBML MML
rso00360 Phenylalanine metabolism SBML MML
rso00361 gamma-Hexachlorocyclohexane degradation SBML MML
rso00362 (Undocumented) SBML MML
rso00363 Bisphenol A degradation SBML MML
rso00364 Fluorobenzoate degradation SBML MML
rso00380 Tryptophan metabolism SBML MML
rso00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
rso00401 Novobiocin biosynthesis SBML MML
rso00410 beta-Alanine metabolism SBML MML
rso00430 Taurine and hypotaurine metabolism SBML MML
rso00450 Selenoamino acid metabolism SBML MML
rso00460 (Undocumented) SBML MML
rso00471 D-Glutamine and D-glutamate metabolism SBML MML
rso00472 D-Arginine and D-ornithine metabolism SBML MML
rso00473 D-Alanine metabolism SBML MML
rso00480 Glutathione metabolism SBML MML
rso00500 Starch and sucrose metabolism SBML MML
rso00510 (Undocumented) SBML MML
rso00520 Amino sugar and nucleotide sugar metabolism SBML MML
rso00521 Streptomycin biosynthesis SBML MML
rso00523 Polyketide sugar unit biosynthesis SBML MML
rso00530 (Undocumented) SBML MML
rso00540 Lipopolysaccharide biosynthesis SBML MML
rso00550 Peptidoglycan biosynthesis SBML MML
rso00561 Glycerolipid metabolism SBML MML
rso00562 Inositol phosphate metabolism SBML MML
rso00564 Glycerophospholipid metabolism SBML MML
rso00565 Ether lipid metabolism SBML MML
rso00590 Arachidonic acid metabolism SBML MML
rso00592 alpha-Linolenic acid metabolism SBML MML
rso00620 Pyruvate metabolism SBML MML
rso00621 (Undocumented) SBML MML
rso00622 Toluene and xylene degradation SBML MML
rso00623 2,4-Dichlorobenzoate degradation SBML MML
rso00624 1- and 2-Methylnaphthalene degradation SBML MML
rso00625 (Undocumented) SBML MML
rso00626 Naphthalene and anthracene degradation SBML MML
rso00627 1,4-Dichlorobenzene degradation SBML MML
rso00628 Fluorene degradation SBML MML
rso00629 Carbazole degradation SBML MML
rso00630 Glyoxylate and dicarboxylate metabolism SBML MML
rso00631 1,2-Dichloroethane degradation SBML MML
rso00632 (Undocumented) SBML MML
rso00633 Trinitrotoluene degradation SBML MML
rso00640 Propanoate metabolism SBML MML
rso00641 3-Chloroacrylic acid degradation SBML MML
rso00642 Ethylbenzene degradation SBML MML
rso00643 Styrene degradation SBML MML
rso00650 Butanoate metabolism SBML MML
rso00660 C5-Branched dibasic acid metabolism SBML MML
rso00670 One carbon pool by folate SBML MML
rso00680 Methane metabolism SBML MML
rso00710 (Undocumented) SBML MML
rso00720 (Undocumented) SBML MML
rso00730 Thiamine metabolism SBML MML
rso00740 Riboflavin metabolism SBML MML
rso00750 Vitamin B6 metabolism SBML MML
rso00760 Nicotinate and nicotinamide metabolism SBML MML
rso00770 Pantothenate and CoA biosynthesis SBML MML
rso00780 Biotin metabolism SBML MML
rso00785 Lipoic acid metabolism SBML MML
rso00790 Folate biosynthesis SBML MML
rso00791 Atrazine degradation SBML MML
rso00860 Porphyrin and chlorophyll metabolism SBML MML
rso00900 Terpenoid backbone biosynthesis SBML MML
rso00903 (Undocumented) SBML MML
rso00910 Nitrogen metabolism SBML MML
rso00920 Sulfur metabolism SBML MML
rso00930 Caprolactam degradation SBML MML
rso00940 (Undocumented) SBML MML
rso00950 (Undocumented) SBML MML
rso00960 (Undocumented) SBML MML
rso00970 Aminoacyl-tRNA biosynthesis SBML MML
rso00980 Metabolism of xenobiotics by cytochrome P450 SBML MML
rso00982 (Undocumented) SBML MML
rso00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.