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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism sag: Streptococcus agalactiae 2603 (serotype V)

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
sag00010 Glycolysis / Gluconeogenesis SBML MML
sag00030 Pentose phosphate pathway SBML MML
sag00040 Pentose and glucuronate interconversions SBML MML
sag00051 Fructose and mannose metabolism SBML MML
sag00052 Galactose metabolism SBML MML
sag00053 Ascorbate and aldarate metabolism SBML MML
sag00061 Fatty acid biosynthesis SBML MML
sag00071 Fatty acid metabolism SBML MML
sag00100 (Undocumented) SBML MML
sag00220 (Undocumented) SBML MML
sag00230 Purine metabolism SBML MML
sag00240 Pyrimidine metabolism SBML MML
sag00251 (Undocumented) SBML MML
sag00252 (Undocumented) SBML MML
sag00260 Glycine, serine and threonine metabolism SBML MML
sag00271 (Undocumented) SBML MML
sag00272 (Undocumented) SBML MML
sag00280 Valine, leucine and isoleucine degradation SBML MML
sag00290 Valine, leucine and isoleucine biosynthesis SBML MML
sag00300 Lysine biosynthesis SBML MML
sag00330 Arginine and proline metabolism SBML MML
sag00340 Histidine metabolism SBML MML
sag00350 Tyrosine metabolism SBML MML
sag00360 Phenylalanine metabolism SBML MML
sag00380 Tryptophan metabolism SBML MML
sag00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
sag00430 Taurine and hypotaurine metabolism SBML MML
sag00440 Phosphonate and phosphinate metabolism SBML MML
sag00450 Selenoamino acid metabolism SBML MML
sag00460 (Undocumented) SBML MML
sag00471 D-Glutamine and D-glutamate metabolism SBML MML
sag00473 D-Alanine metabolism SBML MML
sag00480 Glutathione metabolism SBML MML
sag00500 Starch and sucrose metabolism SBML MML
sag00520 Amino sugar and nucleotide sugar metabolism SBML MML
sag00521 Streptomycin biosynthesis SBML MML
sag00523 Polyketide sugar unit biosynthesis SBML MML
sag00530 (Undocumented) SBML MML
sag00550 Peptidoglycan biosynthesis SBML MML
sag00561 Glycerolipid metabolism SBML MML
sag00562 Inositol phosphate metabolism SBML MML
sag00564 Glycerophospholipid metabolism SBML MML
sag00620 Pyruvate metabolism SBML MML
sag00624 1- and 2-Methylnaphthalene degradation SBML MML
sag00630 Glyoxylate and dicarboxylate metabolism SBML MML
sag00632 (Undocumented) SBML MML
sag00640 Propanoate metabolism SBML MML
sag00641 3-Chloroacrylic acid degradation SBML MML
sag00643 Styrene degradation SBML MML
sag00650 Butanoate metabolism SBML MML
sag00660 C5-Branched dibasic acid metabolism SBML MML
sag00670 One carbon pool by folate SBML MML
sag00680 Methane metabolism SBML MML
sag00710 (Undocumented) SBML MML
sag00730 Thiamine metabolism SBML MML
sag00740 Riboflavin metabolism SBML MML
sag00760 Nicotinate and nicotinamide metabolism SBML MML
sag00770 Pantothenate and CoA biosynthesis SBML MML
sag00780 Biotin metabolism SBML MML
sag00785 Lipoic acid metabolism SBML MML
sag00790 Folate biosynthesis SBML MML
sag00860 Porphyrin and chlorophyll metabolism SBML MML
sag00900 Terpenoid backbone biosynthesis SBML MML
sag00903 (Undocumented) SBML MML
sag00910 Nitrogen metabolism SBML MML
sag00920 Sulfur metabolism SBML MML
sag00960 (Undocumented) SBML MML
sag00970 Aminoacyl-tRNA biosynthesis SBML MML
sag00982 (Undocumented) SBML MML
sag00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.