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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism spk: Streptococcus pyogenes MGAS9429 (serotype M12)

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
spk00010 Glycolysis / Gluconeogenesis SBML MML
spk00030 Pentose phosphate pathway SBML MML
spk00040 Pentose and glucuronate interconversions SBML MML
spk00051 Fructose and mannose metabolism SBML MML
spk00052 Galactose metabolism SBML MML
spk00053 Ascorbate and aldarate metabolism SBML MML
spk00061 Fatty acid biosynthesis SBML MML
spk00071 Fatty acid metabolism SBML MML
spk00072 Synthesis and degradation of ketone bodies SBML MML
spk00100 (Undocumented) SBML MML
spk00120 (Undocumented) SBML MML
spk00220 (Undocumented) SBML MML
spk00230 Purine metabolism SBML MML
spk00240 Pyrimidine metabolism SBML MML
spk00251 (Undocumented) SBML MML
spk00252 (Undocumented) SBML MML
spk00260 Glycine, serine and threonine metabolism SBML MML
spk00271 (Undocumented) SBML MML
spk00272 (Undocumented) SBML MML
spk00280 Valine, leucine and isoleucine degradation SBML MML
spk00290 Valine, leucine and isoleucine biosynthesis SBML MML
spk00300 Lysine biosynthesis SBML MML
spk00310 Lysine degradation SBML MML
spk00330 Arginine and proline metabolism SBML MML
spk00340 Histidine metabolism SBML MML
spk00350 Tyrosine metabolism SBML MML
spk00360 Phenylalanine metabolism SBML MML
spk00361 gamma-Hexachlorocyclohexane degradation SBML MML
spk00380 Tryptophan metabolism SBML MML
spk00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
spk00410 beta-Alanine metabolism SBML MML
spk00430 Taurine and hypotaurine metabolism SBML MML
spk00450 Selenoamino acid metabolism SBML MML
spk00460 (Undocumented) SBML MML
spk00471 D-Glutamine and D-glutamate metabolism SBML MML
spk00473 D-Alanine metabolism SBML MML
spk00480 Glutathione metabolism SBML MML
spk00500 Starch and sucrose metabolism SBML MML
spk00520 Amino sugar and nucleotide sugar metabolism SBML MML
spk00521 Streptomycin biosynthesis SBML MML
spk00523 Polyketide sugar unit biosynthesis SBML MML
spk00530 (Undocumented) SBML MML
spk00550 Peptidoglycan biosynthesis SBML MML
spk00561 Glycerolipid metabolism SBML MML
spk00562 Inositol phosphate metabolism SBML MML
spk00564 Glycerophospholipid metabolism SBML MML
spk00590 Arachidonic acid metabolism SBML MML
spk00620 Pyruvate metabolism SBML MML
spk00624 1- and 2-Methylnaphthalene degradation SBML MML
spk00626 Naphthalene and anthracene degradation SBML MML
spk00630 Glyoxylate and dicarboxylate metabolism SBML MML
spk00632 (Undocumented) SBML MML
spk00640 Propanoate metabolism SBML MML
spk00641 3-Chloroacrylic acid degradation SBML MML
spk00643 Styrene degradation SBML MML
spk00650 Butanoate metabolism SBML MML
spk00670 One carbon pool by folate SBML MML
spk00710 (Undocumented) SBML MML
spk00730 Thiamine metabolism SBML MML
spk00740 Riboflavin metabolism SBML MML
spk00750 Vitamin B6 metabolism SBML MML
spk00760 Nicotinate and nicotinamide metabolism SBML MML
spk00770 Pantothenate and CoA biosynthesis SBML MML
spk00780 Biotin metabolism SBML MML
spk00785 Lipoic acid metabolism SBML MML
spk00790 Folate biosynthesis SBML MML
spk00791 Atrazine degradation SBML MML
spk00860 Porphyrin and chlorophyll metabolism SBML MML
spk00900 Terpenoid backbone biosynthesis SBML MML
spk00903 (Undocumented) SBML MML
spk00910 Nitrogen metabolism SBML MML
spk00920 Sulfur metabolism SBML MML
spk00930 Caprolactam degradation SBML MML
spk00940 (Undocumented) SBML MML
spk00960 (Undocumented) SBML MML
spk00970 Aminoacyl-tRNA biosynthesis SBML MML
spk00980 Metabolism of xenobiotics by cytochrome P450 SBML MML
spk00982 (Undocumented) SBML MML
spk00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.