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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism spm: Streptococcus pyogenes MGAS8232 (serotype M18)

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
spm00010 Glycolysis / Gluconeogenesis SBML MML
spm00020 Citrate cycle (TCA cycle) SBML MML
spm00030 Pentose phosphate pathway SBML MML
spm00040 Pentose and glucuronate interconversions SBML MML
spm00051 Fructose and mannose metabolism SBML MML
spm00052 Galactose metabolism SBML MML
spm00053 Ascorbate and aldarate metabolism SBML MML
spm00061 Fatty acid biosynthesis SBML MML
spm00071 Fatty acid metabolism SBML MML
spm00072 Synthesis and degradation of ketone bodies SBML MML
spm00100 (Undocumented) SBML MML
spm00220 (Undocumented) SBML MML
spm00230 Purine metabolism SBML MML
spm00240 Pyrimidine metabolism SBML MML
spm00251 (Undocumented) SBML MML
spm00252 (Undocumented) SBML MML
spm00260 Glycine, serine and threonine metabolism SBML MML
spm00271 (Undocumented) SBML MML
spm00272 (Undocumented) SBML MML
spm00280 Valine, leucine and isoleucine degradation SBML MML
spm00290 Valine, leucine and isoleucine biosynthesis SBML MML
spm00300 Lysine biosynthesis SBML MML
spm00310 Lysine degradation SBML MML
spm00330 Arginine and proline metabolism SBML MML
spm00340 Histidine metabolism SBML MML
spm00350 Tyrosine metabolism SBML MML
spm00360 Phenylalanine metabolism SBML MML
spm00361 gamma-Hexachlorocyclohexane degradation SBML MML
spm00380 Tryptophan metabolism SBML MML
spm00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
spm00430 Taurine and hypotaurine metabolism SBML MML
spm00450 Selenoamino acid metabolism SBML MML
spm00460 (Undocumented) SBML MML
spm00471 D-Glutamine and D-glutamate metabolism SBML MML
spm00473 D-Alanine metabolism SBML MML
spm00480 Glutathione metabolism SBML MML
spm00500 Starch and sucrose metabolism SBML MML
spm00520 Amino sugar and nucleotide sugar metabolism SBML MML
spm00521 Streptomycin biosynthesis SBML MML
spm00523 Polyketide sugar unit biosynthesis SBML MML
spm00530 (Undocumented) SBML MML
spm00550 Peptidoglycan biosynthesis SBML MML
spm00561 Glycerolipid metabolism SBML MML
spm00562 Inositol phosphate metabolism SBML MML
spm00564 Glycerophospholipid metabolism SBML MML
spm00590 Arachidonic acid metabolism SBML MML
spm00620 Pyruvate metabolism SBML MML
spm00624 1- and 2-Methylnaphthalene degradation SBML MML
spm00630 Glyoxylate and dicarboxylate metabolism SBML MML
spm00632 (Undocumented) SBML MML
spm00640 Propanoate metabolism SBML MML
spm00641 3-Chloroacrylic acid degradation SBML MML
spm00643 Styrene degradation SBML MML
spm00650 Butanoate metabolism SBML MML
spm00670 One carbon pool by folate SBML MML
spm00680 Methane metabolism SBML MML
spm00710 (Undocumented) SBML MML
spm00730 Thiamine metabolism SBML MML
spm00740 Riboflavin metabolism SBML MML
spm00750 Vitamin B6 metabolism SBML MML
spm00760 Nicotinate and nicotinamide metabolism SBML MML
spm00770 Pantothenate and CoA biosynthesis SBML MML
spm00780 Biotin metabolism SBML MML
spm00785 Lipoic acid metabolism SBML MML
spm00790 Folate biosynthesis SBML MML
spm00791 Atrazine degradation SBML MML
spm00860 Porphyrin and chlorophyll metabolism SBML MML
spm00900 Terpenoid backbone biosynthesis SBML MML
spm00903 (Undocumented) SBML MML
spm00910 Nitrogen metabolism SBML MML
spm00920 Sulfur metabolism SBML MML
spm00960 (Undocumented) SBML MML
spm00970 Aminoacyl-tRNA biosynthesis SBML MML
spm00982 (Undocumented) SBML MML
spm00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.