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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism sso: Sulfolobus solfataricus

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
sso00010 Glycolysis / Gluconeogenesis SBML MML
sso00020 Citrate cycle (TCA cycle) SBML MML
sso00030 Pentose phosphate pathway SBML MML
sso00031 (Undocumented) SBML MML
sso00040 Pentose and glucuronate interconversions SBML MML
sso00051 Fructose and mannose metabolism SBML MML
sso00052 Galactose metabolism SBML MML
sso00053 Ascorbate and aldarate metabolism SBML MML
sso00061 Fatty acid biosynthesis SBML MML
sso00062 Fatty acid elongation in mitochondria SBML MML
sso00071 Fatty acid metabolism SBML MML
sso00100 (Undocumented) SBML MML
sso00120 (Undocumented) SBML MML
sso00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
sso00220 (Undocumented) SBML MML
sso00230 Purine metabolism SBML MML
sso00240 Pyrimidine metabolism SBML MML
sso00251 (Undocumented) SBML MML
sso00252 (Undocumented) SBML MML
sso00260 Glycine, serine and threonine metabolism SBML MML
sso00271 (Undocumented) SBML MML
sso00272 (Undocumented) SBML MML
sso00280 Valine, leucine and isoleucine degradation SBML MML
sso00281 Geraniol degradation SBML MML
sso00290 Valine, leucine and isoleucine biosynthesis SBML MML
sso00300 Lysine biosynthesis SBML MML
sso00310 Lysine degradation SBML MML
sso00330 Arginine and proline metabolism SBML MML
sso00340 Histidine metabolism SBML MML
sso00350 Tyrosine metabolism SBML MML
sso00360 Phenylalanine metabolism SBML MML
sso00361 gamma-Hexachlorocyclohexane degradation SBML MML
sso00362 (Undocumented) SBML MML
sso00364 Fluorobenzoate degradation SBML MML
sso00380 Tryptophan metabolism SBML MML
sso00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
sso00401 Novobiocin biosynthesis SBML MML
sso00410 beta-Alanine metabolism SBML MML
sso00450 Selenoamino acid metabolism SBML MML
sso00460 (Undocumented) SBML MML
sso00480 Glutathione metabolism SBML MML
sso00500 Starch and sucrose metabolism SBML MML
sso00510 (Undocumented) SBML MML
sso00520 Amino sugar and nucleotide sugar metabolism SBML MML
sso00521 Streptomycin biosynthesis SBML MML
sso00523 Polyketide sugar unit biosynthesis SBML MML
sso00530 (Undocumented) SBML MML
sso00550 Peptidoglycan biosynthesis SBML MML
sso00561 Glycerolipid metabolism SBML MML
sso00562 Inositol phosphate metabolism SBML MML
sso00564 Glycerophospholipid metabolism SBML MML
sso00592 alpha-Linolenic acid metabolism SBML MML
sso00620 Pyruvate metabolism SBML MML
sso00622 Toluene and xylene degradation SBML MML
sso00624 1- and 2-Methylnaphthalene degradation SBML MML
sso00627 1,4-Dichlorobenzene degradation SBML MML
sso00630 Glyoxylate and dicarboxylate metabolism SBML MML
sso00631 1,2-Dichloroethane degradation SBML MML
sso00632 (Undocumented) SBML MML
sso00640 Propanoate metabolism SBML MML
sso00641 3-Chloroacrylic acid degradation SBML MML
sso00643 Styrene degradation SBML MML
sso00650 Butanoate metabolism SBML MML
sso00660 C5-Branched dibasic acid metabolism SBML MML
sso00670 One carbon pool by folate SBML MML
sso00680 Methane metabolism SBML MML
sso00710 (Undocumented) SBML MML
sso00720 (Undocumented) SBML MML
sso00730 Thiamine metabolism SBML MML
sso00750 Vitamin B6 metabolism SBML MML
sso00760 Nicotinate and nicotinamide metabolism SBML MML
sso00770 Pantothenate and CoA biosynthesis SBML MML
sso00780 Biotin metabolism SBML MML
sso00785 Lipoic acid metabolism SBML MML
sso00790 Folate biosynthesis SBML MML
sso00860 Porphyrin and chlorophyll metabolism SBML MML
sso00900 Terpenoid backbone biosynthesis SBML MML
sso00903 (Undocumented) SBML MML
sso00906 Carotenoid biosynthesis SBML MML
sso00910 Nitrogen metabolism SBML MML
sso00920 Sulfur metabolism SBML MML
sso00930 Caprolactam degradation SBML MML
sso00960 (Undocumented) SBML MML
sso00970 Aminoacyl-tRNA biosynthesis SBML MML
sso00982 (Undocumented) SBML MML
sso00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.