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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism sul: Sulfurihydrogenibium sp. YO3AOP1

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
sul00010 Glycolysis / Gluconeogenesis SBML MML
sul00020 Citrate cycle (TCA cycle) SBML MML
sul00030 Pentose phosphate pathway SBML MML
sul00040 Pentose and glucuronate interconversions SBML MML
sul00051 Fructose and mannose metabolism SBML MML
sul00052 Galactose metabolism SBML MML
sul00061 Fatty acid biosynthesis SBML MML
sul00100 (Undocumented) SBML MML
sul00120 (Undocumented) SBML MML
sul00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
sul00220 (Undocumented) SBML MML
sul00230 Purine metabolism SBML MML
sul00240 Pyrimidine metabolism SBML MML
sul00251 (Undocumented) SBML MML
sul00252 (Undocumented) SBML MML
sul00260 Glycine, serine and threonine metabolism SBML MML
sul00271 (Undocumented) SBML MML
sul00272 (Undocumented) SBML MML
sul00280 Valine, leucine and isoleucine degradation SBML MML
sul00290 Valine, leucine and isoleucine biosynthesis SBML MML
sul00300 Lysine biosynthesis SBML MML
sul00330 Arginine and proline metabolism SBML MML
sul00340 Histidine metabolism SBML MML
sul00350 Tyrosine metabolism SBML MML
sul00360 Phenylalanine metabolism SBML MML
sul00380 Tryptophan metabolism SBML MML
sul00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
sul00401 Novobiocin biosynthesis SBML MML
sul00410 beta-Alanine metabolism SBML MML
sul00450 Selenoamino acid metabolism SBML MML
sul00471 D-Glutamine and D-glutamate metabolism SBML MML
sul00473 D-Alanine metabolism SBML MML
sul00500 Starch and sucrose metabolism SBML MML
sul00520 Amino sugar and nucleotide sugar metabolism SBML MML
sul00521 Streptomycin biosynthesis SBML MML
sul00523 Polyketide sugar unit biosynthesis SBML MML
sul00530 (Undocumented) SBML MML
sul00540 Lipopolysaccharide biosynthesis SBML MML
sul00550 Peptidoglycan biosynthesis SBML MML
sul00561 Glycerolipid metabolism SBML MML
sul00562 Inositol phosphate metabolism SBML MML
sul00564 Glycerophospholipid metabolism SBML MML
sul00620 Pyruvate metabolism SBML MML
sul00630 Glyoxylate and dicarboxylate metabolism SBML MML
sul00632 (Undocumented) SBML MML
sul00640 Propanoate metabolism SBML MML
sul00650 Butanoate metabolism SBML MML
sul00660 C5-Branched dibasic acid metabolism SBML MML
sul00670 One carbon pool by folate SBML MML
sul00680 Methane metabolism SBML MML
sul00710 (Undocumented) SBML MML
sul00720 (Undocumented) SBML MML
sul00730 Thiamine metabolism SBML MML
sul00740 Riboflavin metabolism SBML MML
sul00750 Vitamin B6 metabolism SBML MML
sul00760 Nicotinate and nicotinamide metabolism SBML MML
sul00770 Pantothenate and CoA biosynthesis SBML MML
sul00780 Biotin metabolism SBML MML
sul00790 Folate biosynthesis SBML MML
sul00791 Atrazine degradation SBML MML
sul00860 Porphyrin and chlorophyll metabolism SBML MML
sul00900 Terpenoid backbone biosynthesis SBML MML
sul00910 Nitrogen metabolism SBML MML
sul00970 Aminoacyl-tRNA biosynthesis SBML MML
sul00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.