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Cardiac Physiome Society workshop: November 6-9, 2017 , Toronto

Kegg pathway models for JSim

Organism xfn: Xylella fastidiosa M23

to run JSim applets. See JSim Kegg models page for comlete list of Kegg models.

Kegg linkPathwaySBMLMMLDownload Applet
xfn00010 Glycolysis / Gluconeogenesis SBML MML
xfn00020 Citrate cycle (TCA cycle) SBML MML
xfn00030 Pentose phosphate pathway SBML MML
xfn00040 Pentose and glucuronate interconversions SBML MML
xfn00051 Fructose and mannose metabolism SBML MML
xfn00052 Galactose metabolism SBML MML
xfn00053 Ascorbate and aldarate metabolism SBML MML
xfn00061 Fatty acid biosynthesis SBML MML
xfn00071 Fatty acid metabolism SBML MML
xfn00100 (Undocumented) SBML MML
xfn00120 (Undocumented) SBML MML
xfn00130 Ubiquinone and other terpenoid-quinone biosynthesis SBML MML
xfn00140 (Undocumented) SBML MML
xfn00150 Androgen and estrogen metabolism SBML MML
xfn00220 (Undocumented) SBML MML
xfn00230 Purine metabolism SBML MML
xfn00240 Pyrimidine metabolism SBML MML
xfn00251 (Undocumented) SBML MML
xfn00252 (Undocumented) SBML MML
xfn00260 Glycine, serine and threonine metabolism SBML MML
xfn00271 (Undocumented) SBML MML
xfn00272 (Undocumented) SBML MML
xfn00280 Valine, leucine and isoleucine degradation SBML MML
xfn00290 Valine, leucine and isoleucine biosynthesis SBML MML
xfn00300 Lysine biosynthesis SBML MML
xfn00310 Lysine degradation SBML MML
xfn00330 Arginine and proline metabolism SBML MML
xfn00340 Histidine metabolism SBML MML
xfn00350 Tyrosine metabolism SBML MML
xfn00360 Phenylalanine metabolism SBML MML
xfn00361 gamma-Hexachlorocyclohexane degradation SBML MML
xfn00363 Bisphenol A degradation SBML MML
xfn00380 Tryptophan metabolism SBML MML
xfn00400 Phenylalanine, tyrosine and tryptophan biosynthesis SBML MML
xfn00401 Novobiocin biosynthesis SBML MML
xfn00410 beta-Alanine metabolism SBML MML
xfn00450 Selenoamino acid metabolism SBML MML
xfn00460 (Undocumented) SBML MML
xfn00471 D-Glutamine and D-glutamate metabolism SBML MML
xfn00473 D-Alanine metabolism SBML MML
xfn00480 Glutathione metabolism SBML MML
xfn00500 Starch and sucrose metabolism SBML MML
xfn00520 Amino sugar and nucleotide sugar metabolism SBML MML
xfn00521 Streptomycin biosynthesis SBML MML
xfn00523 Polyketide sugar unit biosynthesis SBML MML
xfn00530 (Undocumented) SBML MML
xfn00540 Lipopolysaccharide biosynthesis SBML MML
xfn00550 Peptidoglycan biosynthesis SBML MML
xfn00561 Glycerolipid metabolism SBML MML
xfn00562 Inositol phosphate metabolism SBML MML
xfn00564 Glycerophospholipid metabolism SBML MML
xfn00590 Arachidonic acid metabolism SBML MML
xfn00620 Pyruvate metabolism SBML MML
xfn00624 1- and 2-Methylnaphthalene degradation SBML MML
xfn00626 Naphthalene and anthracene degradation SBML MML
xfn00630 Glyoxylate and dicarboxylate metabolism SBML MML
xfn00632 (Undocumented) SBML MML
xfn00640 Propanoate metabolism SBML MML
xfn00641 3-Chloroacrylic acid degradation SBML MML
xfn00650 Butanoate metabolism SBML MML
xfn00660 C5-Branched dibasic acid metabolism SBML MML
xfn00670 One carbon pool by folate SBML MML
xfn00680 Methane metabolism SBML MML
xfn00710 (Undocumented) SBML MML
xfn00720 (Undocumented) SBML MML
xfn00730 Thiamine metabolism SBML MML
xfn00740 Riboflavin metabolism SBML MML
xfn00750 Vitamin B6 metabolism SBML MML
xfn00760 Nicotinate and nicotinamide metabolism SBML MML
xfn00770 Pantothenate and CoA biosynthesis SBML MML
xfn00780 Biotin metabolism SBML MML
xfn00790 Folate biosynthesis SBML MML
xfn00791 Atrazine degradation SBML MML
xfn00860 Porphyrin and chlorophyll metabolism SBML MML
xfn00900 Terpenoid backbone biosynthesis SBML MML
xfn00903 (Undocumented) SBML MML
xfn00910 Nitrogen metabolism SBML MML
xfn00920 Sulfur metabolism SBML MML
xfn00930 Caprolactam degradation SBML MML
xfn00940 (Undocumented) SBML MML
xfn00950 (Undocumented) SBML MML
xfn00960 (Undocumented) SBML MML
xfn00970 Aminoacyl-tRNA biosynthesis SBML MML
xfn00980 Metabolism of xenobiotics by cytochrome P450 SBML MML
xfn00982 (Undocumented) SBML MML
xfn00983 (Undocumented) SBML MML

Model development and archiving support at physiome.org provided by the following grants: NIH/NIBIB BE08407 Software Integration, JSim and SBW 6/1/09-5/31/13; NIH/NHLBI T15 HL88516-01 Modeling for Heart, Lung and Blood: From Cell to Organ, 4/1/07-3/31/11; NSF BES-0506477 Adaptive Multi-Scale Model Simulation, 8/15/05-7/31/08; NIH/NHLBI R01 HL073598 Core 3: 3D Imaging and Computer Modeling of the Respiratory Tract, 9/1/04-8/31/09; as well as prior support from NIH/NCRR P41 RR01243 Simulation Resource in Circulatory Mass Transport and Exchange, 12/1/1980-11/30/01 and NIH/NIBIB R01 EB001973 JSim: A Simulation Analysis Platform, 3/1/02-2/28/07.